RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 SCAF8Q9UPN6 1271 aaKnown RBP31.74■■■□□ 2.67
TRNP1-201ENST00000522111 MTMR7Q9Y216 660 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 DDAH1O94760 285 aa31.73■■■□□ 2.67
TRNP1-201ENST00000522111 ZNF280AP59817 542 aaPredicted RBP31.73■■■□□ 2.67
TRNP1-201ENST00000522111 GUCY1B3Q02153 619 aa31.73■■■□□ 2.67
TRNP1-201ENST00000522111 SAMD7Q7Z3H4 446 aa31.73■■■□□ 2.67
TRNP1-201ENST00000522111 ZBED3Q96IU2 234 aaPredicted RBP31.73■■■□□ 2.67
TRNP1-201ENST00000522111 ATRNL1Q5VV63 1379 aa31.73■■■□□ 2.67
TRNP1-201ENST00000522111 PNMA1Q8ND90 353 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.72■■■□□ 2.67
TRNP1-201ENST00000522111 SLC26A6Q9BXS9 759 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 CNTNAP1P78357 1384 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 CCDC196A0A1B0GTZ2 297 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 UBE2Q2LH0YL09 131 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 MPHOSPH10O00566 681 aaKnown RBP31.72■■■□□ 2.67
TRNP1-201ENST00000522111 TBC1D10BQ4KMP7 808 aaPredicted RBP31.72■■■□□ 2.67
TRNP1-201ENST00000522111 CCDC178Q5BJE1 867 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 CLEC10AQ8IUN9 316 aa31.72■■■□□ 2.67
TRNP1-201ENST00000522111 CALM1P0DP23 149 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 CALM2P0DP24 149 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 CALM3P0DP25 149 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 DPF2Q92785 391 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 AIFM3Q96NN9 605 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 TMEM47Q9BQJ4 181 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 GJB4Q9NTQ9 266 aa31.7■■■□□ 2.67
TRNP1-201ENST00000522111 TMEM39BQ9GZU3 492 aa31.7■■■□□ 2.66
TRNP1-201ENST00000522111 DDX11L8A8MPP1 907 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 PLEKHA8P1O95397 391 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 IFNAR1P17181 557 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 OTUD7BQ6GQQ9 843 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 CDAN1Q8IWY9 1227 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 CTCFLQ8NI51 663 aaPredicted RBP31.69■■■□□ 2.66
TRNP1-201ENST00000522111 FAM151AQ8WW52 585 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 ANKS1AQ92625 1134 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 RNF181Q9P0P0 153 aa31.69■■■□□ 2.66
TRNP1-201ENST00000522111 PLIN4Q96Q06 1357 aa31.68■■■□□ 2.66
TRNP1-201ENST00000522111 PDIA4P13667 645 aaKnown RBP31.68■■■□□ 2.66
TRNP1-201ENST00000522111 SSRP1Q08945 709 aaKnown RBP31.68■■■□□ 2.66
TRNP1-201ENST00000522111 SHROOM1Q2M3G4 852 aaPredicted RBP31.68■■■□□ 2.66
TRNP1-201ENST00000522111 COL2A1P02458 1487 aaPredicted RBP31.68■■■□□ 2.66
TRNP1-201ENST00000522111 FOXP4Q8IVH2 680 aaPredicted RBP31.67■■■□□ 2.66
TRNP1-201ENST00000522111 C8orf76Q96K31 380 aa31.67■■■□□ 2.66
TRNP1-201ENST00000522111 ASTN2O75129 1339 aaPredicted RBP31.67■■■□□ 2.66
TRNP1-201ENST00000522111 FMNL1O95466 1100 aaPredicted RBP31.67■■■□□ 2.66
TRNP1-201ENST00000522111 RASGRP2Q7LDG7 609 aa31.67■■■□□ 2.66
TRNP1-201ENST00000522111 ALG1Q9BT22 464 aa31.67■■■□□ 2.66
TRNP1-201ENST00000522111 RBM28Q9NW13 759 aaKnown RBP31.67■■■□□ 2.66
TRNP1-201ENST00000522111 TCHHQ07283 1943 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 GOLGA6L22H0YM25 854 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 PPP2R5BQ15173 497 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 CERKLQ49MI3 558 aaPredicted RBP31.66■■■□□ 2.66
TRNP1-201ENST00000522111 FAM173BQ6P4H8 233 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 NBPF11Q86T75 865 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 MTMR4Q9NYA4 1195 aa31.66■■■□□ 2.66
TRNP1-201ENST00000522111 GUCY1A2P33402 732 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 TRIM22Q8IYM9 498 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 KIF4BQ2VIQ3 1234 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 FKBP1CQ5VVH2 108 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 GPC2Q8N158 579 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 ATP6V1DQ9Y5K8 247 aa31.65■■■□□ 2.66
TRNP1-201ENST00000522111 GDF11O95390 407 aa31.64■■■□□ 2.66
TRNP1-201ENST00000522111 MMP14P50281 582 aa31.64■■■□□ 2.66
TRNP1-201ENST00000522111 GDPD2Q9HCC8 539 aa31.64■■■□□ 2.66
TRNP1-201ENST00000522111 STK36Q9NRP7 1315 aa31.64■■■□□ 2.66
TRNP1-201ENST00000522111 hCG_1642624A0A1W2PR95 340 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 TATDN1Q6P1N9 297 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 TMTC3Q6ZXV5 915 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 LRRC47Q8N1G4 583 aaKnown RBP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 MYH6P13533 1939 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 GREB1LQ9C091 1923 aaPredicted RBP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 IGKV6D-41A0A0C4DH26 115 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 H7C1D1 291 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 TOP1P11387 765 aaKnown RBP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 NCLP19338 710 aaKnown RBP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 ATP2B2Q01814 1243 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 DNM1Q05193 864 aaKnown RBP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 CCDC17Q96LX7 622 aa31.63■■■□□ 2.65
TRNP1-201ENST00000522111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.63■■■□□ 2.65
TRNP1-201ENST00000522111 FAM83AQ86UY5 434 aa31.62■■■□□ 2.65
TRNP1-201ENST00000522111 METTL16Q86W50 562 aaKnown RBP31.62■■■□□ 2.65
TRNP1-201ENST00000522111 CNPY2Q9Y2B0 182 aa31.62■■■□□ 2.65
TRNP1-201ENST00000522111 BAZ2BQ9UIF8 2168 aaKnown RBP31.61■■■□□ 2.65
TRNP1-201ENST00000522111 STAG2Q8N3U4 1231 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 SRBD1Q8N5C6 995 aaKnown RBP31.61■■■□□ 2.65
TRNP1-201ENST00000522111 FBXO18Q8NFZ0 1043 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 GPRC5DQ9NZD1 345 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 CLIP2Q9UDT6 1046 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 KIF5BP33176 963 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 FUT2Q10981 343 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 RESTQ13127 1097 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 RASA3Q14644 834 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 C9orf131Q5VYM1 1079 aa31.61■■■□□ 2.65
TRNP1-201ENST00000522111 DDNO94850 711 aaPredicted RBP31.6■■■□□ 2.65
TRNP1-201ENST00000522111 TTLL1O95922 423 aa31.6■■■□□ 2.65
TRNP1-201ENST00000522111 NOVP48745 357 aa31.6■■■□□ 2.65
TRNP1-201ENST00000522111 MIGA2Q7L4E1 593 aa31.6■■■□□ 2.65
TRNP1-201ENST00000522111 PIBF1Q8WXW3 757 aa31.6■■■□□ 2.65
TRNP1-201ENST00000522111 HACL1Q9UJ83 578 aa31.6■■■□□ 2.65
TRNP1-201ENST00000522111 PRPF40AO75400 957 aaKnown RBP31.59■■■□□ 2.65
TRNP1-201ENST00000522111 GOLGA8HP0CJ92 632 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms