RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CATSPERGQ6ZRH7 1159 aa11.39□□□□□ -0.59
NUP50-215ENST00000484186 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
NUP50-215ENST00000484186 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
NUP50-215ENST00000484186 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
NUP50-215ENST00000484186 BRCA2P51587 3418 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 PRKAB2O43741 272 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 MBD4O95243 580 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
NUP50-215ENST00000484186 MAPK4P31152 587 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 ERVK-24P63145 666 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 EVX2Q03828 476 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 SEPT2Q15019 361 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 DPF3Q92784 378 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 DEFB118Q96PH6 123 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 PAK6Q9NQU5 681 aaPredicted RBP11.38□□□□□ -0.59
NUP50-215ENST00000484186 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
NUP50-215ENST00000484186 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
NUP50-215ENST00000484186 HMGCRP04035 888 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 CHGBP05060 677 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 CYP2D6P10635 497 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 VCAM1P19320 739 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 CCAR1Q8IX12 1150 aaKnown RBP11.37□□□□□ -0.59
NUP50-215ENST00000484186 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 PORCNQ9H237 461 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 RABGAP1Q9Y3P9 1069 aa11.37□□□□□ -0.59
NUP50-215ENST00000484186 RPTORQ8N122 1335 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 CNMDO75829 334 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 XRCC5P13010 732 aaKnown RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 CYP2B6P20813 491 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 HABP4Q5JVS0 413 aaKnown RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 C12orf60Q5U649 245 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 GPR142Q7Z601 462 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 PLEKHH3Q7Z736 793 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.591e-8■■■■■ 27
NUP50-215ENST00000484186 PUS7LQ9H0K6 701 aaKnown RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
NUP50-215ENST00000484186 SLC4A4Q9Y6R1 1079 aa11.36□□□□□ -0.59
NUP50-215ENST00000484186 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
NUP50-215ENST00000484186 CYP2D7A0A087X1C5 515 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 A0A1W2PRG0 241 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 USP17L12C9JPN9 530 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 USP17L21D6R901 530 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 H0YGN5 161 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 CDK8P49336 464 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 CCNA1P78396 465 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 TRIM32Q13049 653 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 MORN1Q5T089 497 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
NUP50-215ENST00000484186 TRIB2Q92519 343 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 USP6NLQ92738 828 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
NUP50-215ENST00000484186 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
NUP50-215ENST00000484186 NAV1Q8NEY1 1877 aa11.35□□□□□ -0.59
NUP50-215ENST00000484186 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
NUP50-215ENST00000484186 AKR1B1P15121 316 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 RGS2P41220 211 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 COG2Q14746 738 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 KBTBD3Q8NAB2 608 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
NUP50-215ENST00000484186 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
NUP50-215ENST00000484186 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
NUP50-215ENST00000484186 SMIM22K7EJ46 135 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 MAP3K21Q5TCX8 1036 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
NUP50-215ENST00000484186 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
NUP50-215ENST00000484186 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
NUP50-215ENST00000484186 SLC15A5A6NIM6 579 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
NUP50-215ENST00000484186 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms