RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CABP5Q9NP86 173 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 MCM9Q9NXL9 1143 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 RCAN3Q9UKA8 241 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 NR2E3Q9Y5X4 410 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 RPTORQ8N122 1335 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 NAV1Q8NEY1 1877 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 TCRBV5S4A2TA0A5A2 114 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L15C9J2P7 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L13C9JLJ4 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L11C9JVI0 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L18D6R9N7 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L22D6RA61 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L17D6RBQ6 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L19D6RCP7 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L20D6RJB6 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 RAB11FIP3O75154 756 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 MAPK4P31152 587 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 USP17L24Q0WX57 530 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 SLFNL1Q499Z3 407 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 LCORLQ8N3X6 602 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 DIS3LQ8TF46 1054 aaKnown RBP22.82■■□□□ 1.24
ABCF3-214ENST00000480562 SDR42E1Q8WUS8 393 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
ABCF3-214ENST00000480562 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
ABCF3-214ENST00000480562 CAPN2P17655 700 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 GUCY1A2P33402 732 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 USP14P54578 494 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 GABPAQ06546 454 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 PDE3AQ14432 1141 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 GTF3C2Q8WUA4 911 aaPredicted RBP22.81■■□□□ 1.24
ABCF3-214ENST00000480562 SOCS4Q8WXH5 440 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 BOLA2Q9H3K6 86 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 ARMT1Q9H993 441 aa22.81■■□□□ 1.24
ABCF3-214ENST00000480562 RBM27Q9P2N5 1060 aaKnown RBP22.81■■□□□ 1.24
ABCF3-214ENST00000480562 EVI5O60447 810 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 CNMDO75829 334 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 CYP2D6P10635 497 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 PRKAR2AP13861 404 aaKnown RBP22.8■■□□□ 1.24
ABCF3-214ENST00000480562 VCAM1P19320 739 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 SEPT2Q15019 361 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 CATSPERGQ6ZRH7 1159 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 GPR142Q7Z601 462 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 DCP1AQ9NPI6 582 aaPredicted RBP22.8■■□□□ 1.24
ABCF3-214ENST00000480562 PAG1Q9NWQ8 432 aa22.8■■□□□ 1.24
ABCF3-214ENST00000480562 MPHOSPH10O00566 681 aaKnown RBP22.79■■□□□ 1.24
ABCF3-214ENST00000480562 XRCC5P13010 732 aaKnown RBP22.79■■□□□ 1.24
ABCF3-214ENST00000480562 MORN1Q5T089 497 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 C20orf194Q5TEA3 1177 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 NECAB2Q7Z6G3 386 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 PLEKHH3Q7Z736 793 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 USP6NLQ92738 828 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
ABCF3-214ENST00000480562 PRKAB2O43741 272 aa22.78■■□□□ 1.24
ABCF3-214ENST00000480562 ZKSCAN1P17029 563 aaPredicted RBP22.78■■□□□ 1.24
ABCF3-214ENST00000480562 CCL14Q16627 93 aa22.78■■□□□ 1.24
ABCF3-214ENST00000480562 MAP3K21Q5TCX8 1036 aa22.78■■□□□ 1.24
ABCF3-214ENST00000480562 SLC44A5Q8NCS7 719 aa22.78■■□□□ 1.24
ABCF3-214ENST00000480562 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
ABCF3-214ENST00000480562 RPAP3Q9H6T3 665 aaPredicted RBP22.78■■□□□ 1.24
ABCF3-214ENST00000480562 CWC22Q9HCG8 908 aaKnown RBP22.78■■□□□ 1.24
ABCF3-214ENST00000480562 RANBP2P49792 3224 aaKnown RBP22.78■■□□□ 1.24
ABCF3-214ENST00000480562 MBD4O95243 580 aa22.77■■□□□ 1.24
ABCF3-214ENST00000480562 CHGBP05060 677 aa22.77■■□□□ 1.24
ABCF3-214ENST00000480562 ATP5JP18859 108 aa22.77■■□□□ 1.24
ABCF3-214ENST00000480562 RGS2P41220 211 aa22.77■■□□□ 1.24
ABCF3-214ENST00000480562 DYNLL2Q96FJ2 89 aa22.77■■□□□ 1.24
ABCF3-214ENST00000480562 ADD2P35612 726 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 MNX1P50219 401 aaPredicted RBP22.76■■□□□ 1.23
ABCF3-214ENST00000480562 WDR78Q5VTH9 848 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 ANKLE1Q8NAG6 615 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 HAUS7Q99871 368 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 PRO3102Q9H379 93 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 BTBD7Q9P203 1132 aa22.76■■□□□ 1.23
ABCF3-214ENST00000480562 A0A1W2PRG0 241 aa22.75■■□□□ 1.23
ABCF3-214ENST00000480562 SMARCA5O60264 1052 aaPredicted RBP22.75■■□□□ 1.23
ABCF3-214ENST00000480562 CCNA1P78396 465 aa22.75■■□□□ 1.23
ABCF3-214ENST00000480562 CACNB2Q08289 660 aaPredicted RBP22.75■■□□□ 1.23
ABCF3-214ENST00000480562 TRMT44Q8IYL2 757 aaKnown RBP22.75■■□□□ 1.23
ABCF3-214ENST00000480562 OGDHLQ9ULD0 1010 aa22.75■■□□□ 1.23
ABCF3-214ENST00000480562 SPDYE16A6NNV3 312 aaPredicted RBP22.74■■□□□ 1.23
ABCF3-214ENST00000480562 SMIM22K7EJ46 135 aa22.74■■□□□ 1.23
ABCF3-214ENST00000480562 APBA2Q99767 749 aa22.74■■□□□ 1.23
ABCF3-214ENST00000480562 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.74■■□□□ 1.23
ABCF3-214ENST00000480562 NBPF3Q9H094 633 aa22.74■■□□□ 1.23
ABCF3-214ENST00000480562 ALPK3Q96L96 1907 aa22.74■■□□□ 1.23
ABCF3-214ENST00000480562 CYP2D7A0A087X1C5 515 aa22.73■■□□□ 1.23
ABCF3-214ENST00000480562 CCND3P30281 292 aaPredicted RBP22.73■■□□□ 1.23
ABCF3-214ENST00000480562 MAP2K5Q13163 448 aa22.73■■□□□ 1.23
ABCF3-214ENST00000480562 LBX2Q6XYB7 198 aa22.73■■□□□ 1.23
ABCF3-214ENST00000480562 CLEC10AQ8IUN9 316 aa22.73■■□□□ 1.23
ABCF3-214ENST00000480562 LRRCC1Q9C099 1032 aa22.73■■□□□ 1.23
ABCF3-214ENST00000480562 GLRX3O76003 335 aaKnown RBP22.72■■□□□ 1.23
ABCF3-214ENST00000480562 AKR1B1P15121 316 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 PTPREP23469 700 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 KIAA1755Q5JYT7 1200 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 TMEM179Q6ZVK1 233 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 C7orf61Q8IZ16 206 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 C11orf49Q9H6J7 331 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 ATP8A2Q9NTI2 1148 aa22.72■■□□□ 1.23
ABCF3-214ENST00000480562 SWAP70Q9UH65 585 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms