RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 MPHOSPH10O00566 681 aaKnown RBP14.15□□□□□ -0.14
VARS2-208ENST00000477052 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
VARS2-208ENST00000477052 EVI5O60447 810 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 TTC6Q86TZ1 520 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 CLEC10AQ8IUN9 316 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 DYNLL2Q96FJ2 89 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 NUDT12Q9BQG2 462 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 EHD4Q9H223 541 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 HMX1Q9NP08 348 aaPredicted RBP14.15□□□□□ -0.14
VARS2-208ENST00000477052 GINM1Q9NU53 330 aa14.15□□□□□ -0.14
VARS2-208ENST00000477052 ALPK3Q96L96 1907 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 CYP2D7A0A087X1C5 515 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 VCAM1P19320 739 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 RPAP2Q8IXW5 612 aaPredicted RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 CRNKL1Q9BZJ0 848 aaKnown RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 DDX60LQ5H9U9 1706 aaKnown RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 RANBP2P49792 3224 aaKnown RBP14.14□□□□□ -0.15
VARS2-208ENST00000477052 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 RPTORQ8N122 1335 aa14.14□□□□□ -0.15
VARS2-208ENST00000477052 A0A1W2PRG0 241 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L15C9J2P7 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L13C9JLJ4 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L11C9JVI0 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L18D6R9N7 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L22D6RA61 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L17D6RBQ6 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L19D6RCP7 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L20D6RJB6 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 CCND3P30281 292 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 MAPK4P31152 587 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 GABPAQ06546 454 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 CACNB2Q08289 660 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP17L24Q0WX57 530 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 TTF1Q15361 905 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 PLEKHH3Q7Z736 793 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 USP6NLQ92738 828 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 C12orf42Q96LP6 360 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 RPAP3Q9H6T3 665 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 CWC22Q9HCG8 908 aaKnown RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 CABP5Q9NP86 173 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 DCP1AQ9NPI6 582 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 STAP2Q9UGK3 403 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 RCAN3Q9UKA8 241 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
VARS2-208ENST00000477052 DDX19BQ9UMR2 479 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
VARS2-208ENST00000477052 IGSF3O75054 1194 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 HMMRO75330 724 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 MBD4O95243 580 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 MS4A1P11836 297 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 ZKSCAN1P17029 563 aaPredicted RBP14.12□□□□□ -0.15
VARS2-208ENST00000477052 MORN1Q5T089 497 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 CERS3Q8IU89 383 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 KIAA1683Q9H0B3 1180 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 PAG1Q9NWQ8 432 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 FLRT1Q9NZU1 646 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 SZT2Q5T011 3432 aa14.12□□□□□ -0.15
VARS2-208ENST00000477052 SYN1P17600 705 aa14.11□□□□□ -0.15
VARS2-208ENST00000477052 ADD2P35612 726 aa14.11□□□□□ -0.15
VARS2-208ENST00000477052 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
VARS2-208ENST00000477052 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
VARS2-208ENST00000477052 SOCS4Q8WXH5 440 aa14.11□□□□□ -0.15
VARS2-208ENST00000477052 PRO3102Q9H379 93 aa14.11□□□□□ -0.15
VARS2-208ENST00000477052 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
VARS2-208ENST00000477052 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 AKR1B1P15121 316 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 RGS2P41220 211 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 USP14P54578 494 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 MAP2K5Q13163 448 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.1□□□□□ -0.15
VARS2-208ENST00000477052 C11orf49Q9H6J7 331 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 OGDHLQ9ULD0 1010 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
VARS2-208ENST00000477052 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
VARS2-208ENST00000477052 SOX1O00570 391 aaPredicted RBP14.09□□□□□ -0.15
VARS2-208ENST00000477052 XRCC5P13010 732 aaKnown RBP14.09□□□□□ -0.15
VARS2-208ENST00000477052 ATP5JP18859 108 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 STK11IPQ8N1F8 1099 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 NPLOC4Q8TAT6 608 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 APBA2Q99767 749 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 HAUS7Q99871 368 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 TANGO6Q9C0B7 1094 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
VARS2-208ENST00000477052 PFASO15067 1338 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms