RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MYH8P13535 1937 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
USF1-204ENST00000472217 USP14P54578 494 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 UBXN2AP68543 259 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 SEPT2Q15019 361 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 PXYLP1Q8TE99 480 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 SWAP70Q9UH65 585 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
USF1-204ENST00000472217 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L21D6R901 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 INHAP05111 366 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 GJB1P08034 283 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 VCAM1P19320 739 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 C12orf60Q5U649 245 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 GPRC5AQ8NFJ5 357 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 OTUD7AQ8TE49 926 aaPredicted RBP10.86□□□□□ -0.67
USF1-204ENST00000472217 PAGR1Q9BTK6 254 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 RNF208Q9H0X6 261 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 PDE4DIPQ5VU43 2346 aa10.86□□□□□ -0.67
USF1-204ENST00000472217 TTC41PQ6P2S7 1318 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
USF1-204ENST00000472217 A0A1W2PRG0 241 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 GJA8P48165 433 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 CDK8P49336 464 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 ERVK-24P63145 666 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 Q3C1V9 767 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 CATSPERGQ6ZRH7 1159 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 TMEM179Q6ZVK1 233 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 AMOTL1Q8IY63 956 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 PI4K2BQ8TCG2 481 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
USF1-204ENST00000472217 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
USF1-204ENST00000472217 APPBP2Q92624 585 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 PORCNQ9H237 461 aa10.85□□□□□ -0.67
USF1-204ENST00000472217 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 CENPFP49454 3210 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
USF1-204ENST00000472217 CNMDO75829 334 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 AKR1B1P15121 316 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 MAPK4P31152 587 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
USF1-204ENST00000472217 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
USF1-204ENST00000472217 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
USF1-204ENST00000472217 DOCK3Q8IZD9 2030 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
USF1-204ENST00000472217 GSG1L2A8MUP6 293 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 M0R2C6 588 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 ERC2O15083 957 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 GPAA1O43292 621 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 SGPL1O95470 568 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 HMGCRP04035 888 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 ZFYP08048 801 aaPredicted RBP10.83□□□□□ -0.68
USF1-204ENST00000472217 MX1P20591 662 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 ICA1Q05084 483 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 TRIM32Q13049 653 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 KIAA1755Q5JYT7 1200 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 LBX2Q6XYB7 198 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 GPR142Q7Z601 462 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 UBE2Q1Q7Z7E8 422 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 SOCS4Q8WXH5 440 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 CCDC17Q96LX7 622 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 EPB41L4AQ9HCS5 686 aaPredicted RBP10.83□□□□□ -0.68
USF1-204ENST00000472217 PAK6Q9NQU5 681 aaPredicted RBP10.83□□□□□ -0.68
USF1-204ENST00000472217 BTBD7Q9P203 1132 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 RABGAP1Q9Y3P9 1069 aa10.83□□□□□ -0.68
USF1-204ENST00000472217 RLFQ13129 1914 aa10.82□□□□□ -0.68
USF1-204ENST00000472217 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
USF1-204ENST00000472217 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
USF1-204ENST00000472217 SPDYE16A6NNV3 312 aaPredicted RBP10.82□□□□□ -0.68
USF1-204ENST00000472217 GLRX3O76003 335 aaKnown RBP10.82□□□□□ -0.68
USF1-204ENST00000472217 CYP2B6P20813 491 aa10.82□□□□□ -0.68
USF1-204ENST00000472217 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
USF1-204ENST00000472217 PLEKHH3Q7Z736 793 aa10.82□□□□□ -0.68
USF1-204ENST00000472217 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms