RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 NAA15Q9BXJ9 866 aaKnown RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 HSD3B7Q9H2F3 369 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 RAPGEF3O95398 923 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 CCND1P24385 295 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 SESN3P58005 492 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 APBA1Q02410 837 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 CUL4BQ13620 913 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 TTMPQ5BVD1 217 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 NBPF14Q5TI25 921 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 OPTNQ96CV9 577 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 MTRQ99707 1265 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00342-202ENST00000448494 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00342-202ENST00000448494 CFAP73A6NFT4 308 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 N4BP3O15049 544 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 CEP104O60308 925 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 DIAPH2O60879 1101 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 GSTA1P08263 222 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
LINC00342-202ENST00000448494 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 CERKQ8TCT0 537 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 DPF2Q92785 391 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 SDF4Q9BRK5 362 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 DESI2Q9BSY9 194 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 LZTFL1Q9NQ48 299 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 FANCLQ9NW38 375 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 GALNT8Q9NY28 637 aa12□□□□□ -0.49
LINC00342-202ENST00000448494 MBD4O95243 580 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 CDC25CP30307 473 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 MDH1P40925 334 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 TMEM62Q0P6H9 643 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 HIBCHQ6NVY1 386 aaPredicted RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 APBB1IPQ7Z5R6 666 aaPredicted RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 SLC35F6Q8N357 371 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 TRAPPC9Q96Q05 1148 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 IWS1Q96ST2 819 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 ATP1A3P13637 1013 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 MTX1Q13505 466 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 CMPK2Q5EBM0 449 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 ZMYM1Q5SVZ6 1142 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 MAATS1Q7Z4T9 603 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 ARL10Q8N8L6 244 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 ATRIPQ8WXE1 791 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 KCNN1Q92952 543 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
LINC00342-202ENST00000448494 TTF2Q9UNY4 1162 aaKnown RBP11.99□□□□□ -0.49
LINC00342-202ENST00000448494 SMAPO00193 183 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 HSF2BPO75031 334 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 MYL5Q02045 173 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 ZNF268Q14587 947 aaPredicted RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 POSTNQ15063 836 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 PPP1R14BQ96C90 147 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 HVCN1Q96D96 273 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 IL25Q9H293 177 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 DMAP1Q9NPF5 467 aaPredicted RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 ATP8A1Q9Y2Q0 1164 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 C5orf60A6NFR6 353 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 CKAP4Q07065 602 aaKnown RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 SEPT2Q15019 361 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 ANKRD1Q15327 319 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 PPP1R7Q15435 360 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 SPRED3Q2MJR0 410 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 SPECC1LQ69YQ0 1117 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 RASGRP2Q7LDG7 609 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 ELOA2Q8IYF1 753 aaPredicted RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 AGAP11Q8TF27 550 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 SNRNP27Q8WVK2 155 aaKnown RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 ARL8AQ96BM9 186 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 BRD8Q9H0E9 1235 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 TUBGCP4Q9UGJ1 667 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms