RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 PPARAQ07869 468 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 GTF3C2Q8WUA4 911 aaPredicted RBP14.56□□□□□ -0.08
LTBR-204ENST00000444814 ERO1AQ96HE7 468 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 FAM227BQ96M60 508 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 RNF41Q9H4P4 317 aaPredicted RBP14.56□□□□□ -0.08
LTBR-204ENST00000444814 KANSL2Q9H9L4 492 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 AGTPBP1Q9UPW5 1226 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 ROBO3Q96MS0 1386 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 GPR25O00155 361 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 TBC1D8O95759 1140 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 BMP2KLQ5H9B9 411 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
LTBR-204ENST00000444814 DYNLL2Q96FJ2 89 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 HSPD1P10809 573 aaKnown RBP14.55□□□□□ -0.08
LTBR-204ENST00000444814 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
LTBR-204ENST00000444814 IRX3P78415 501 aaPredicted RBP14.55□□□□□ -0.08
LTBR-204ENST00000444814 CRHR2Q13324 411 aa14.55□□□□□ -0.08
LTBR-204ENST00000444814 MTMR2Q13614 643 aa14.55□□□□□ -0.08
LTBR-204ENST00000444814 CCDC129Q6ZRS4 1044 aa14.55□□□□□ -0.08
LTBR-204ENST00000444814 DSCC1Q9BVC3 393 aa14.55□□□□□ -0.08
LTBR-204ENST00000444814 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
LTBR-204ENST00000444814 DDX60LQ5H9U9 1706 aaKnown RBP14.55□□□□□ -0.08
LTBR-204ENST00000444814 TLR2O60603 784 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 TSPY3P0CV98 308 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 TSPY8P0CW00 308 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 HMGCS2P54868 508 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 ICA1Q05084 483 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 FAM43AQ8N2R8 423 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 PTPN18Q99952 460 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 KIAA1683Q9H0B3 1180 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
LTBR-204ENST00000444814 ANAPC4Q9UJX5 808 aa14.54□□□□□ -0.08
LTBR-204ENST00000444814 LAMB1P07942 1786 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 ZNF213O14771 459 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 SLURP2P0DP57 97 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
LTBR-204ENST00000444814 SP3Q02447 781 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 RRP1BQ14684 758 aaKnown RBP14.53□□□□□ -0.08
LTBR-204ENST00000444814 PKN2Q16513 984 aaKnown RBP14.53□□□□□ -0.08
LTBR-204ENST00000444814 IMMTQ16891 758 aaKnown RBP14.53□□□□□ -0.08
LTBR-204ENST00000444814 LPAR1Q92633 364 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 GOPCQ9HD26 462 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 TOMM22Q9NS69 142 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
LTBR-204ENST00000444814 SEPT2Q15019 361 aa14.52□□□□□ -0.08
LTBR-204ENST00000444814 SLC44A5Q8NCS7 719 aa14.52□□□□□ -0.08
LTBR-204ENST00000444814 C12orf42Q96LP6 360 aa14.52□□□□□ -0.08
LTBR-204ENST00000444814 TSPY2A6NKD2 308 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 GNRH1P01148 92 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 FGAP02671 866 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 AKR1B1P15121 316 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 CHMLP26374 656 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 ATP2B2Q01814 1243 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 CCDC178Q5BJE1 867 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 SIPA1L1O43166 1804 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 HMGB1P09429 215 aaKnown RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 HOXD10P28358 340 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 GPAT2Q6NUI2 795 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 CTU1Q7Z7A3 348 aaKnown RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 ZNF589Q86UQ0 364 aaPredicted RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 CCDC84Q86UT8 332 aaPredicted RBP14.51□□□□□ -0.09
LTBR-204ENST00000444814 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
LTBR-204ENST00000444814 ORC4O43929 436 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 RASA1P20936 1047 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 TNS4Q8IZW8 715 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 ESR2Q92731 530 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 NYAP2Q9P242 653 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
LTBR-204ENST00000444814 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
LTBR-204ENST00000444814 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
LTBR-204ENST00000444814 CDC45O75419 566 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 TTLL1O95922 423 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 PRMT2P55345 433 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 TFAP4Q01664 338 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 TRDNQ13061 729 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 MOGSQ13724 837 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 ZYXQ15942 572 aaKnown RBP14.49□□□□□ -0.09
LTBR-204ENST00000444814 AKNAD1Q5T1N1 836 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 CCAR1Q8IX12 1150 aaKnown RBP14.49□□□□□ -0.09
LTBR-204ENST00000444814 NEDD1Q8NHV4 660 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 KRT23Q9C075 422 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 TMX2Q9Y320 296 aa14.49□□□□□ -0.09
LTBR-204ENST00000444814 BAZ2AQ9UIF9 1905 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms