RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 Q3C1V9 767 aa22.26■■□□□ 1.15
NUP50-207ENST00000424634 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
NUP50-207ENST00000424634 CRBNQ96SW2 442 aa22.26■■□□□ 1.15
NUP50-207ENST00000424634 FEZ1Q99689 392 aa22.26■■□□□ 1.15
NUP50-207ENST00000424634 PLXNB2O15031 1838 aa22.26■■□□□ 1.15
NUP50-207ENST00000424634 UBXN2AP68543 259 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 C12orf60Q5U649 245 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 ZSCAN25Q6NSZ9 544 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 RNF208Q9H0X6 261 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 UNC93B1Q9H1C4 597 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 SLC4A4Q9Y6R1 1079 aa22.25■■□□□ 1.15
NUP50-207ENST00000424634 MYH8P13535 1937 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 A0A1W2PRG0 241 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 USP17L21D6R901 530 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 INHAP05111 366 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 GJB1P08034 283 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 USP14P54578 494 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 GPRC5AQ8NFJ5 357 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 OTUD7AQ8TE49 926 aaPredicted RBP22.24■■□□□ 1.15
NUP50-207ENST00000424634 TAOK2Q9UL54 1235 aa22.24■■□□□ 1.15
NUP50-207ENST00000424634 USP17L15C9J2P7 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L13C9JLJ4 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L11C9JVI0 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L18D6R9N7 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L22D6RA61 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L17D6RBQ6 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L19D6RCP7 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L20D6RJB6 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 MPHOSPH10O00566 681 aaKnown RBP22.23■■□□□ 1.15
NUP50-207ENST00000424634 VCAM1P19320 739 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 GJA8P48165 433 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 USP17L24Q0WX57 530 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 CATSPERGQ6ZRH7 1159 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 SIAH1Q8IUQ4 282 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 GPATCH3Q96I76 525 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 STRBPQ96SI9 672 aaKnown RBP22.23■■□□□ 1.15
NUP50-207ENST00000424634 SWAP70Q9UH65 585 aa22.23■■□□□ 1.15
NUP50-207ENST00000424634 CDK8P49336 464 aa22.22■■□□□ 1.15
NUP50-207ENST00000424634 ERVK-9P63128 1117 aa22.22■■□□□ 1.15
NUP50-207ENST00000424634 ERVK-24P63145 666 aa22.22■■□□□ 1.15
NUP50-207ENST00000424634 CTR9Q6PD62 1173 aa22.22■■□□□ 1.15
NUP50-207ENST00000424634 OSBP2Q969R2 916 aa22.22■■□□□ 1.15
NUP50-207ENST00000424634 CNMDO75829 334 aa22.21■■□□□ 1.15
NUP50-207ENST00000424634 AKR1B1P15121 316 aa22.21■■□□□ 1.15
NUP50-207ENST00000424634 PI4K2BQ8TCG2 481 aa22.21■■□□□ 1.15
NUP50-207ENST00000424634 PAGR1Q9BTK6 254 aa22.21■■□□□ 1.15
NUP50-207ENST00000424634 PORCNQ9H237 461 aa22.21■■□□□ 1.15
NUP50-207ENST00000424634 RNF113AO15541 343 aaKnown RBP22.2■■□□□ 1.14
NUP50-207ENST00000424634 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
NUP50-207ENST00000424634 TMEM179Q6ZVK1 233 aa22.2■■□□□ 1.14
NUP50-207ENST00000424634 CLEC10AQ8IUN9 316 aa22.2■■□□□ 1.14
NUP50-207ENST00000424634 RPAP3Q9H6T3 665 aaPredicted RBP22.2■■□□□ 1.14
NUP50-207ENST00000424634 GSG1L2A8MUP6 293 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 C16orf86Q6ZW13 317 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 UBE2Q1Q7Z7E8 422 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 NKX2-3Q8TAU0 364 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 U2AF1L4Q8WU68 220 aaKnown RBP22.19■■□□□ 1.14
NUP50-207ENST00000424634 GTF3C2Q8WUA4 911 aaPredicted RBP22.19■■□□□ 1.14
NUP50-207ENST00000424634 APPBP2Q92624 585 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 TTC41PQ6P2S7 1318 aa22.19■■□□□ 1.14
NUP50-207ENST00000424634 SGPL1O95470 568 aa22.18■■□□□ 1.14
NUP50-207ENST00000424634 TRIM32Q13049 653 aa22.18■■□□□ 1.14
NUP50-207ENST00000424634 DDRGK1Q96HY6 314 aa22.18■■□□□ 1.14
NUP50-207ENST00000424634 BTBD7Q9P203 1132 aa22.18■■□□□ 1.14
NUP50-207ENST00000424634 RLFQ13129 1914 aa22.18■■□□□ 1.14
NUP50-207ENST00000424634 CEP290O15078 2479 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 SALL3Q9BXA9 1300 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 M0R2C6 588 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 CYP2B6P20813 491 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 MAPK4P31152 587 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 GPR142Q7Z601 462 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 USP6NLQ92738 828 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 CCDC17Q96LX7 622 aa22.17■■□□□ 1.14
NUP50-207ENST00000424634 PAK6Q9NQU5 681 aaPredicted RBP22.17■■□□□ 1.14
NUP50-207ENST00000424634 SPDYE16A6NNV3 312 aaPredicted RBP22.16■■□□□ 1.14
NUP50-207ENST00000424634 ZFYP08048 801 aaPredicted RBP22.16■■□□□ 1.14
NUP50-207ENST00000424634 SBK1Q52WX2 424 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 MORN1Q5T089 497 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 AMOTL1Q8IY63 956 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 TRIB2Q92519 343 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 DEFB118Q96PH6 123 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 NUDT12Q9BQG2 462 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 TMX2Q9Y320 296 aa22.16■■□□□ 1.14
NUP50-207ENST00000424634 ERC2O15083 957 aa22.15■■□□□ 1.14
NUP50-207ENST00000424634 GPAA1O43292 621 aa22.15■■□□□ 1.14
NUP50-207ENST00000424634 GLRX3O76003 335 aaKnown RBP22.15■■□□□ 1.14
NUP50-207ENST00000424634 HMGCRP04035 888 aa22.15■■□□□ 1.14
NUP50-207ENST00000424634 ANKRD45Q5TZF3 282 aa22.15■■□□□ 1.14
NUP50-207ENST00000424634 PLEKHH3Q7Z736 793 aa22.15■■□□□ 1.14
NUP50-207ENST00000424634 SEC62Q99442 399 aaKnown RBP22.15■■□□□ 1.14
NUP50-207ENST00000424634 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.15■■□□□ 1.14
NUP50-207ENST00000424634 ARPP21Q9UBL0 812 aaPredicted RBP22.15■■□□□ 1.14
NUP50-207ENST00000424634 XRCC5P13010 732 aaKnown RBP22.14■■□□□ 1.13
NUP50-207ENST00000424634 MX1P20591 662 aa22.14■■□□□ 1.13
NUP50-207ENST00000424634 ICA1Q05084 483 aa22.14■■□□□ 1.13
NUP50-207ENST00000424634 HDAC1Q13547 482 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms