RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 U2AF1L4Q8WU68 220 aaKnown RBP22.76■■□□□ 1.23
MCF2L-207ENST00000397024 FEZ1Q99689 392 aa22.76■■□□□ 1.23
MCF2L-207ENST00000397024 KIAA1683Q9H0B3 1180 aa22.76■■□□□ 1.23
MCF2L-207ENST00000397024 PCDHB15Q9Y5E8 787 aa22.76■■□□□ 1.23
MCF2L-207ENST00000397024 PLXNB2O15031 1838 aa22.75■■□□□ 1.23
MCF2L-207ENST00000397024 CYP2D7A0A087X1C5 515 aa22.75■■□□□ 1.23
MCF2L-207ENST00000397024 UBE3CQ15386 1083 aa22.75■■□□□ 1.23
MCF2L-207ENST00000397024 NKX2-3Q8TAU0 364 aa22.75■■□□□ 1.23
MCF2L-207ENST00000397024 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.75■■□□□ 1.23
MCF2L-207ENST00000397024 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
MCF2L-207ENST00000397024 A0A1W2PRG0 241 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L15C9J2P7 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L13C9JLJ4 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L11C9JVI0 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L18D6R9N7 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L22D6RA61 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L17D6RBQ6 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L19D6RCP7 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L20D6RJB6 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 SGPL1O95470 568 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L24Q0WX57 530 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 TRIM32Q13049 653 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 TSHZ3Q63HK5 1081 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 PAGR1Q9BTK6 254 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
MCF2L-207ENST00000397024 PORCNQ9H237 461 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 ATP8A2Q9NTI2 1148 aa22.74■■□□□ 1.23
MCF2L-207ENST00000397024 BAZ2AQ9UIF9 1905 aaKnown RBP22.74■■□□□ 1.23
MCF2L-207ENST00000397024 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
MCF2L-207ENST00000397024 CNMDO75829 334 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 VCAM1P19320 739 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 USP14P54578 494 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 ERVK-9P63128 1117 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 ERVK-24P63145 666 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 DEFB118Q96PH6 123 aa22.73■■□□□ 1.23
MCF2L-207ENST00000397024 MYH7P12883 1935 aa22.72■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L12C9JPN9 530 aa22.72■■□□□ 1.23
MCF2L-207ENST00000397024 USP17L21D6R901 530 aa22.72■■□□□ 1.23
MCF2L-207ENST00000397024 SIAH1Q8IUQ4 282 aa22.72■■□□□ 1.23
MCF2L-207ENST00000397024 PAK6Q9NQU5 681 aaPredicted RBP22.72■■□□□ 1.23
MCF2L-207ENST00000397024 CYP2B6P20813 491 aa22.71■■□□□ 1.23
MCF2L-207ENST00000397024 KIAA1755Q5JYT7 1200 aa22.71■■□□□ 1.23
MCF2L-207ENST00000397024 C12orf60Q5U649 245 aa22.71■■□□□ 1.23
MCF2L-207ENST00000397024 HMGCRP04035 888 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 AKR1B1P15121 316 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 CLEC10AQ8IUN9 316 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 TRIB2Q92519 343 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 USP6NLQ92738 828 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 RPAP3Q9H6T3 665 aaPredicted RBP22.7■■□□□ 1.22
MCF2L-207ENST00000397024 SWAP70Q9UH65 585 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 RABGAP1Q9Y3P9 1069 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 SLC4A4Q9Y6R1 1079 aa22.7■■□□□ 1.22
MCF2L-207ENST00000397024 H0YGN5 161 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
MCF2L-207ENST00000397024 MAPK4P31152 587 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 CDK8P49336 464 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 ZSCAN25Q6NSZ9 544 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 GPR142Q7Z601 462 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 GTF3C2Q8WUA4 911 aaPredicted RBP22.69■■□□□ 1.22
MCF2L-207ENST00000397024 NUDT12Q9BQG2 462 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 CRISPLD2Q9H0B8 497 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 BTBD7Q9P203 1132 aa22.69■■□□□ 1.22
MCF2L-207ENST00000397024 FARP2O94887 1054 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-207ENST00000397024 MORN1Q5T089 497 aa22.68■■□□□ 1.22
MCF2L-207ENST00000397024 TMEM179Q6ZVK1 233 aa22.68■■□□□ 1.22
MCF2L-207ENST00000397024 KBTBD3Q8NAB2 608 aa22.68■■□□□ 1.22
MCF2L-207ENST00000397024 OTUD7AQ8TE49 926 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-207ENST00000397024 STRBPQ96SI9 672 aaKnown RBP22.68■■□□□ 1.22
MCF2L-207ENST00000397024 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.68■■□□□ 1.22
MCF2L-207ENST00000397024 SPDYE16A6NNV3 312 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-207ENST00000397024 RRP1P56182 461 aaKnown RBP22.67■■□□□ 1.22
MCF2L-207ENST00000397024 HABP4Q5JVS0 413 aaKnown RBP22.67■■□□□ 1.22
MCF2L-207ENST00000397024 LBX2Q6XYB7 198 aa22.67■■□□□ 1.22
MCF2L-207ENST00000397024 PLEKHH3Q7Z736 793 aa22.67■■□□□ 1.22
MCF2L-207ENST00000397024 DPF3Q92784 378 aa22.67■■□□□ 1.22
MCF2L-207ENST00000397024 OSBP2Q969R2 916 aa22.67■■□□□ 1.22
MCF2L-207ENST00000397024 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
MCF2L-207ENST00000397024 XRCC5P13010 732 aaKnown RBP22.66■■□□□ 1.22
MCF2L-207ENST00000397024 CCL14Q16627 93 aa22.66■■□□□ 1.22
MCF2L-207ENST00000397024 C16orf86Q6ZW13 317 aa22.66■■□□□ 1.22
MCF2L-207ENST00000397024 CCAR1Q8IX12 1150 aaKnown RBP22.66■■□□□ 1.22
MCF2L-207ENST00000397024 RANBP2P49792 3224 aaKnown RBP22.65■■□□□ 1.22
MCF2L-207ENST00000397024 RPTORQ8N122 1335 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 GSG1L2A8MUP6 293 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 RNF113AO15541 343 aaKnown RBP22.65■■□□□ 1.22
MCF2L-207ENST00000397024 MAP3K21Q5TCX8 1036 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 SOCS4Q8WXH5 440 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 GPATCH3Q96I76 525 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 HMX1Q9NP08 348 aaPredicted RBP22.65■■□□□ 1.22
MCF2L-207ENST00000397024 MYH8P13535 1937 aa22.65■■□□□ 1.22
MCF2L-207ENST00000397024 CCDC17Q96LX7 622 aa22.64■■□□□ 1.21
MCF2L-207ENST00000397024 CRBNQ96SW2 442 aa22.64■■□□□ 1.21
MCF2L-207ENST00000397024 COLQQ9Y215 455 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-207ENST00000397024 TMX2Q9Y320 296 aa22.64■■□□□ 1.21
MCF2L-207ENST00000397024 RLFQ13129 1914 aa22.63■■□□□ 1.21
MCF2L-207ENST00000397024 ICA1Q05084 483 aa22.63■■□□□ 1.21
MCF2L-207ENST00000397024 COG2Q14746 738 aa22.63■■□□□ 1.21
MCF2L-207ENST00000397024 SPICE1Q8N0Z3 855 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms