RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 LRRIQ3A6PVS8 624 aaPredicted RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 GGT7Q9UJ14 662 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 BAG2O95816 211 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 ZNF174Q15697 407 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 ADGRG1Q9Y653 693 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 SNUPNO95149 360 aaKnown RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 NAP1L3Q99457 506 aaPredicted RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 A0A1W2PQ27 194 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 A0A1W2PQ64 194 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 A0A1W2PQD8 194 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.33
SRPK1-204ENST00000373825 PSMC4P43686 418 aa17.08■□□□□ 0.33
SRPK1-204ENST00000373825 DNMT1P26358 1616 aaKnown RBP17.08■□□□□ 0.33
SRPK1-204ENST00000373825 RANBP6O60518 1105 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 TCP1P17987 556 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 PDCD2Q16342 344 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 LONP2Q86WA8 852 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 CSGALNACT2Q8N6G5 542 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 LINC00301Q8NCQ3 95 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 CARD10Q9BWT7 1032 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 USP14P54578 494 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 SEMA3FQ13275 785 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 ZNF473Q8WTR7 871 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 TMEM110-MUSTN1A8MSY1 372 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 RAPGEF1Q13905 1077 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 CFAP157Q5JU67 520 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 ALS2CLQ60I27 953 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 ADAT2Q7Z6V5 191 aaKnown RBP17.08■□□□□ 0.32
SRPK1-204ENST00000373825 OSBPL9Q96SU4 736 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 NBPF3Q9H094 633 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 RTEL1Q9NZ71 1219 aa17.08■□□□□ 0.32
SRPK1-204ENST00000373825 FAM135AQ9P2D6 1515 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 PPP1R37O75864 691 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 KRT14P02533 472 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 BATF3Q9NR55 127 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 CCDC13Q8IYE1 715 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
SRPK1-204ENST00000373825 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 HPCAL4Q9UM19 191 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 KCNJ14Q9UNX9 436 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 APBA1Q02410 837 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 ARMC3Q5W041 872 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 EGFL6Q8IUX8 553 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 PSMD1Q99460 953 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
SRPK1-204ENST00000373825 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
SRPK1-204ENST00000373825 A0A087WZG4 1122 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 KCNK3O14649 394 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 TMCO4Q5TGY1 634 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 REXO1L1PQ8IX06 675 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 STX2P32856 288 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 CUL3Q13618 768 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-204ENST00000373825 DESP17661 470 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 MCM7P33993 719 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 RTN1Q16799 776 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 SWT1Q5T5J6 900 aaKnown RBP17.06■□□□□ 0.32
SRPK1-204ENST00000373825 DENND2CQ68D51 928 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 RAB3IPQ96QF0 476 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-204ENST00000373825 CCDC77Q9BR77 488 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 LAMB3Q13751 1172 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 KCNB1Q14721 858 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 SPATA1Q5VX52 437 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
SRPK1-204ENST00000373825 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-204ENST00000373825 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
SRPK1-204ENST00000373825 RTEL1-TNFRSF6BF6WH68 1400 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 HNRNPCP07910 306 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■□□□ 11.7
SRPK1-204ENST00000373825 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 NAA35Q5VZE5 725 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 RRAGAQ7L523 313 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
SRPK1-204ENST00000373825 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms