RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRIM34Q9BYJ4 488 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 KIF5BP33176 963 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 PRELPP51888 382 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 ARHGAP27Q6ZUM4 889 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 SH3BP5LQ7L8J4 393 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 CCDC17Q96LX7 622 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 ALG1Q9BT22 464 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 DPF2Q92785 391 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 MYOZ2Q9NPC6 264 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 LMBRD1Q9NUN5 540 aa30.57■■■□□ 2.48
ATPAF1-202ENST00000371937 FOSBP53539 338 aa30.56■■■□□ 2.48
ATPAF1-202ENST00000371937 ZNF280AP59817 542 aaPredicted RBP30.56■■■□□ 2.48
ATPAF1-202ENST00000371937 NBPF11Q86T75 865 aa30.56■■■□□ 2.48
ATPAF1-202ENST00000371937 ZBED3Q96IU2 234 aaPredicted RBP30.56■■■□□ 2.48
ATPAF1-202ENST00000371937 TMEM47Q9BQJ4 181 aa30.56■■■□□ 2.48
ATPAF1-202ENST00000371937 MYH8P13535 1937 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 CLRN2A0PK11 232 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 PRPF40AO75400 957 aaKnown RBP30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 NOVP48745 357 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 RESTQ13127 1097 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 CEP95Q96GE4 821 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 SYT17Q9BSW7 474 aa30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 RNF26Q9BY78 433 aaPredicted RBP30.55■■■□□ 2.48
ATPAF1-202ENST00000371937 DEXIO95424 95 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 METTL16Q86W50 562 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 FAM151AQ8WW52 585 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 TCP10L2B9ZVM9 353 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 TOP1P11387 765 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 AKR1B1P15121 316 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 LMNB1P20700 586 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 AKAP17AQ02040 695 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 CSPP1Q1MSJ5 1256 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 PPP4R3BQ5MIZ7 849 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 TMTC3Q6ZXV5 915 aa30.54■■■□□ 2.48
ATPAF1-202ENST00000371937 GUCY1B3Q02153 619 aa30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 DNM1Q05193 864 aaKnown RBP30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 TRIM29Q14134 588 aa30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 CCDC82Q8N4S0 544 aa30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 MTMR4Q9NYA4 1195 aa30.53■■■□□ 2.48
ATPAF1-202ENST00000371937 WNT10BO00744 389 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 NCLP19338 710 aaKnown RBP30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 KRT85P78386 507 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 DNAJC18Q9H819 358 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 CNPY2Q9Y2B0 182 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 GJA3Q9Y6H8 435 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 IGKV6D-41A0A0C4DH26 115 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 GMPSP49915 693 aaPredicted RBP30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 GNAQP50148 359 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 CMTR1Q8N1G2 835 aaKnown RBP30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 TMEM87AQ8NBN3 555 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 CSRNP1Q96S65 589 aa30.52■■■□□ 2.48
ATPAF1-202ENST00000371937 SIPA1L1O43166 1804 aa30.51■■■□□ 2.47
ATPAF1-202ENST00000371937 FUT2Q10981 343 aa30.51■■■□□ 2.47
ATPAF1-202ENST00000371937 TATDN1Q6P1N9 297 aa30.51■■■□□ 2.47
ATPAF1-202ENST00000371937 FAM83AQ86UY5 434 aa30.51■■■□□ 2.47
ATPAF1-202ENST00000371937 VEZTQ9HBM0 779 aa30.51■■■□□ 2.47
ATPAF1-202ENST00000371937 PRPF3O43395 683 aaKnown RBP30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 PLEKHA8P1O95397 391 aa30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 GRM4Q14833 912 aa30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 HERC5Q9UII4 1024 aaKnown RBP30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 CERKLQ49MI3 558 aaPredicted RBP30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 AIFM3Q96NN9 605 aa30.5■■■□□ 2.47
ATPAF1-202ENST00000371937 MPHOSPH10O00566 681 aaKnown RBP30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 TTLL1O95922 423 aa30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 NBPF9Q3BBW0 867 aa30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 OTUD7BQ6GQQ9 843 aa30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 USP48Q86UV5 1035 aa30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 MICALL2Q8IY33 904 aa30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 DDX49Q9Y6V7 483 aaKnown RBP30.49■■■□□ 2.47
ATPAF1-202ENST00000371937 TCHHQ07283 1943 aa30.48■■■□□ 2.47
ATPAF1-202ENST00000371937 KRT40Q6A162 431 aa30.48■■■□□ 2.47
ATPAF1-202ENST00000371937 CNOT7Q9UIV1 285 aaKnown RBP30.48■■■□□ 2.47
ATPAF1-202ENST00000371937 FAM173BQ6P4H8 233 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 SRBD1Q8N5C6 995 aaKnown RBP30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 SCAND2PQ9GZW5 306 aaPredicted RBP30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 GDPD2Q9HCC8 539 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 RBM27Q9P2N5 1060 aaKnown RBP30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 CNTNAP1P78357 1384 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 SHTN1A0MZ66 631 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 GUCY1A2P33402 732 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 KLHL40Q2TBA0 621 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 ATL3Q6DD88 541 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 BRAPQ7Z569 592 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 LZTS2Q9BRK4 669 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 GJB4Q9NTQ9 266 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 ZNF541Q9H0D2 1346 aa30.47■■■□□ 2.47
ATPAF1-202ENST00000371937 FIBPO43427 364 aa30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 XBP1P17861 261 aa30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 TNNI2P48788 182 aa30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 MAD2L2Q9UI95 211 aa30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 CFAP45Q9UL16 551 aa30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 V9GY48 417 aaPredicted RBP30.46■■■□□ 2.47
ATPAF1-202ENST00000371937 CNTNAP5Q8WYK1 1306 aa30.45■■■□□ 2.47
ATPAF1-202ENST00000371937 FAM196BA6NMK8 535 aa30.45■■■□□ 2.47
ATPAF1-202ENST00000371937 DICER1Q9UPY3 1922 aaKnown RBP30.45■■■□□ 2.47
ATPAF1-202ENST00000371937 CLIP2Q9UDT6 1046 aa30.45■■■□□ 2.46
ATPAF1-202ENST00000371937 GREB1LQ9C091 1923 aaPredicted RBP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 PALM3A6NDB9 673 aaPredicted RBP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 UBE2Q2LH0YL09 131 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms