RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 TRMT44Q8IYL2 757 aaKnown RBP21.39■■□□□ 1.01
CKLF-202ENST00000345436 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 SLC4A4Q9Y6R1 1079 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 ELNP15502 786 aa21.38■■□□□ 1.01
CKLF-202ENST00000345436 SHROOM1Q2M3G4 852 aaPredicted RBP21.38■■□□□ 1.01
CKLF-202ENST00000345436 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
CKLF-202ENST00000345436 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
CKLF-202ENST00000345436 MYH1P12882 1939 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 TFRCP02786 760 aaKnown RBP21.37■■□□□ 1.01
CKLF-202ENST00000345436 ERVK-9P63128 1117 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 ERVK-24P63145 666 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 KBTBD3Q8NAB2 608 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 PAGR1Q9BTK6 254 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 HTATIP2Q9BUP3 242 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 ARHGEF10LQ9HCE6 1279 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 LOC285556D6RIA3 1793 aa21.37■■□□□ 1.01
CKLF-202ENST00000345436 CENPFP49454 3210 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 SGPL1O95470 568 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 HMGCRP04035 888 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
CKLF-202ENST00000345436 SEPT2Q15019 361 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 U2AF1L4Q8WU68 220 aaKnown RBP21.36■■□□□ 1.01
CKLF-202ENST00000345436 UNC93B1Q9H1C4 597 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 HOXC10Q9NYD6 342 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 RBPJLQ9UBG7 517 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 CDK5RAP2Q96SN8 1893 aa21.36■■□□□ 1.01
CKLF-202ENST00000345436 TTC41PQ6P2S7 1318 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 SIPA1L1O43166 1804 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 USP17L21D6R901 530 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 PRKAB2O43741 272 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
CKLF-202ENST00000345436 GNAT2P19087 354 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 VCAM1P19320 739 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 C12orf60Q5U649 245 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 ACER1Q8TDN7 264 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
CKLF-202ENST00000345436 GJD2Q9UKL4 321 aa21.35■■□□□ 1.01
CKLF-202ENST00000345436 ZSWIM8A7E2V4 1837 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 AAMPQ13685 434 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 PLEKHH3Q7Z736 793 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 LPAR1Q92633 364 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 DPF3Q92784 378 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 ZNF287Q9HBT7 754 aa21.34■■□□□ 1.01
CKLF-202ENST00000345436 HMX1Q9NP08 348 aaPredicted RBP21.34■■□□□ 1.01
CKLF-202ENST00000345436 RNF113AO15541 343 aaKnown RBP21.33■■□□□ 1.01
CKLF-202ENST00000345436 CYP2D6P10635 497 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 RGS2P41220 211 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 COG2Q14746 738 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 LBX2Q6XYB7 198 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 APPBP2Q92624 585 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 PUS7LQ9H0K6 701 aaKnown RBP21.33■■□□□ 1.01
CKLF-202ENST00000345436 RPAP3Q9H6T3 665 aaPredicted RBP21.33■■□□□ 1.01
CKLF-202ENST00000345436 TXNRD2Q9NNW7 524 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 IVNS1ABPQ9Y6Y0 642 aa21.33■■□□□ 1.01
CKLF-202ENST00000345436 MGAMO43451 1857 aa21.32■■□□□ 1
CKLF-202ENST00000345436 RPTORQ8N122 1335 aa21.32■■□□□ 1
CKLF-202ENST00000345436 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
CKLF-202ENST00000345436 CYP2B6P20813 491 aa21.32■■□□□ 1
CKLF-202ENST00000345436 GUCY1A2P33402 732 aa21.32■■□□□ 1
CKLF-202ENST00000345436 CDK8P49336 464 aa21.32■■□□□ 1
CKLF-202ENST00000345436 DYNLL2Q96FJ2 89 aa21.32■■□□□ 1
CKLF-202ENST00000345436 DEFB118Q96PH6 123 aa21.32■■□□□ 1
CKLF-202ENST00000345436 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
CKLF-202ENST00000345436 KANSL2Q9H9L4 492 aa21.32■■□□□ 1
CKLF-202ENST00000345436 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
CKLF-202ENST00000345436 ICA1Q05084 483 aa21.31■■□□□ 1
CKLF-202ENST00000345436 Q3C1V9 767 aa21.31■■□□□ 1
CKLF-202ENST00000345436 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
CKLF-202ENST00000345436 WDR78Q5VTH9 848 aa21.31■■□□□ 1
CKLF-202ENST00000345436 CTR9Q6PD62 1173 aa21.31■■□□□ 1
CKLF-202ENST00000345436 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
CKLF-202ENST00000345436 GPR142Q7Z601 462 aa21.31■■□□□ 1
CKLF-202ENST00000345436 TANGO6Q9C0B7 1094 aa21.31■■□□□ 1
CKLF-202ENST00000345436 MKNK2Q9HBH9 465 aa21.31■■□□□ 1
CKLF-202ENST00000345436 PAK6Q9NQU5 681 aaPredicted RBP21.31■■□□□ 1
CKLF-202ENST00000345436 NR2E3Q9Y5X4 410 aa21.31■■□□□ 1
CKLF-202ENST00000345436 APPP05067 770 aa21.3■■□□□ 1
CKLF-202ENST00000345436 ZKSCAN1P17029 563 aaPredicted RBP21.3■■□□□ 1
CKLF-202ENST00000345436 SBK1Q52WX2 424 aa21.3■■□□□ 1
CKLF-202ENST00000345436 MB21D1Q8N884 522 aa21.3■■□□□ 1
CKLF-202ENST00000345436 SLC44A5Q8NCS7 719 aa21.3■■□□□ 1
CKLF-202ENST00000345436 SHISA4Q96DD7 197 aa21.3■■□□□ 1
CKLF-202ENST00000345436 NACAP1Q9BZK3 213 aa21.3■■□□□ 1
CKLF-202ENST00000345436 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.3■■□□□ 1
CKLF-202ENST00000345436 ANKLE1Q8NAG6 615 aa21.29■■□□□ 1
CKLF-202ENST00000345436 TMX2Q9Y320 296 aa21.29■■□□□ 1
CKLF-202ENST00000345436 A0A1W2PRG0 241 aa21.28■■□□□ 1
CKLF-202ENST00000345436 SLC15A5A6NIM6 579 aa21.28■■□□□ 1
CKLF-202ENST00000345436 SLC34A2O95436 690 aa21.28■■□□□ 1
CKLF-202ENST00000345436 AKR1B1P15121 316 aa21.28■■□□□ 1
CKLF-202ENST00000345436 TDO2P48775 406 aa21.28■■□□□ 1
CKLF-202ENST00000345436 ATP2B2Q01814 1243 aa21.28■■□□□ 1
CKLF-202ENST00000345436 APBA2Q99767 749 aa21.28■■□□□ 1
CKLF-202ENST00000345436 PORCNQ9H237 461 aa21.28■■□□□ 1
CKLF-202ENST00000345436 GOPCQ9HD26 462 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms