RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 CRKP46108 304 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 TMEM47Q9BQJ4 181 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 CLSTN2Q9H4D0 955 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 GAKO14976 1311 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 TYRO3Q06418 890 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 HOMER1Q86YM7 354 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
ARHGEF3-202ENST00000338458 STK36Q9NRP7 1315 aa11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 RAD17O75943 681 aa11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 EARS2Q5JPH6 523 aaKnown RBP11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 ISM2Q6H9L7 571 aa11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 PODNQ7Z5L7 613 aa11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 RNF26Q9BY78 433 aaPredicted RBP11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.55
ARHGEF3-202ENST00000338458 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 DDAH1O94760 285 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 CALM1P0DP23 149 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 CALM2P0DP24 149 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 CALM3P0DP25 149 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 DPEP1P16444 411 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 FUT2Q10981 343 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 ANO6Q4KMQ2 910 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 CEP95Q96GE4 821 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 PCDHB6Q9Y5E3 794 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 LUZP1Q86V48 1076 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 LRRC47Q8N1G4 583 aaKnown RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 XBP1P17861 261 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■□□□□ 8.9
ARHGEF3-202ENST00000338458 SNW1Q13573 536 aaKnown RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 ADALQ6DHV7 355 aa11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 APOBEC3HQ6NTF7 200 aaKnown RBP11.64□□□□□ -0.55
ARHGEF3-202ENST00000338458 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 BIN1O00499 593 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 YEATS4O95619 227 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 AKR1B1P15121 316 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 NLRP5P59047 1200 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 GRIN1Q05586 938 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 FUCA2Q9BTY2 467 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 ADAMTSL1Q8N6G6 1762 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 FRMPD2Q68DX3 1309 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 SLC39A14Q15043 492 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
ARHGEF3-202ENST00000338458 MYH6P13533 1939 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 KIF5BP33176 963 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 DGKHQ86XP1 1220 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 FBXO41Q8TF61 875 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 DACT2Q5SW24 774 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 PDILTQ8N807 584 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 NAV1Q8NEY1 1877 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 NRXN2Q9P2S2 1712 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 YDJCA8MPS7 323 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 PFKFB1P16118 471 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 KRT2P35908 639 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 AXDND1Q5T1B0 1012 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
ARHGEF3-202ENST00000338458 LAMB1P07942 1786 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 WNT7AO00755 349 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 SCG2P13521 617 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 ZNF174Q15697 407 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 PIK3AP1Q6ZUJ8 805 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 ENGASEQ8NFI3 743 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 CLIP2Q9UDT6 1046 aa11.61□□□□□ -0.55
ARHGEF3-202ENST00000338458 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms