RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 RABGAP1Q9Y3P9 1069 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 MYH1P12882 1939 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 HMGCRP04035 888 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
CKS2-201ENST00000314355 SHMT1P34896 483 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 ERVK-24P63145 666 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 WDR78Q5VTH9 848 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 CATSPERGQ6ZRH7 1159 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 UNC93B1Q9H1C4 597 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 HMX1Q9NP08 348 aaPredicted RBP15.24■□□□□ 0.03
CKS2-201ENST00000314355 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 MYO5AQ9Y4I1 1855 aaKnown RBP15.24■□□□□ 0.03
CKS2-201ENST00000314355 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
CKS2-201ENST00000314355 ATAD5Q96QE3 1844 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 USP17L12C9JPN9 530 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 USP17L21D6R901 530 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 CYP2B6P20813 491 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 GABPAQ06546 454 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 SEPT2Q15019 361 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 PLEKHH3Q7Z736 793 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 DEFB118Q96PH6 123 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 RBPJLQ9UBG7 517 aa15.23■□□□□ 0.03
CKS2-201ENST00000314355 RPTORQ8N122 1335 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 PTPRFP10586 1907 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 PRKAB2O43741 272 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 APPP05067 770 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 GNAT2P19087 354 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 RGS2P41220 211 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 COG2Q14746 738 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
CKS2-201ENST00000314355 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 RPAP3Q9H6T3 665 aaPredicted RBP15.22■□□□□ 0.03
CKS2-201ENST00000314355 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 ARPP21Q9UBL0 812 aaPredicted RBP15.22■□□□□ 0.03
CKS2-201ENST00000314355 NR2E3Q9Y5X4 410 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
CKS2-201ENST00000314355 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 RNF113AO15541 343 aaKnown RBP15.21■□□□□ 0.03
CKS2-201ENST00000314355 FARP2O94887 1054 aaPredicted RBP15.21■□□□□ 0.03
CKS2-201ENST00000314355 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
CKS2-201ENST00000314355 VCAM1P19320 739 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 CDK8P49336 464 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 RRP1P56182 461 aaKnown RBP15.21■□□□□ 0.03
CKS2-201ENST00000314355 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 Q3C1V9 767 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 GPR142Q7Z601 462 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 LPAR1Q92633 364 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 TANGO6Q9C0B7 1094 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 GJD2Q9UKL4 321 aa15.21■□□□□ 0.03
CKS2-201ENST00000314355 MGAMO43451 1857 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 RAD21O60216 631 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
CKS2-201ENST00000314355 ICA1Q05084 483 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 GIMAP6Q6P9H5 292 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 APPBP2Q92624 585 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
CKS2-201ENST00000314355 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.02
CKS2-201ENST00000314355 PUS7LQ9H0K6 701 aaKnown RBP15.2■□□□□ 0.02
CKS2-201ENST00000314355 KANSL2Q9H9L4 492 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 TXNRD2Q9NNW7 524 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 RBBP6Q7Z6E9 1792 aaKnown RBP15.2■□□□□ 0.02
CKS2-201ENST00000314355 ZSWIM8A7E2V4 1837 aa15.2■□□□□ 0.02
CKS2-201ENST00000314355 CDK5RAP2Q96SN8 1893 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 SLC3A2P08195 630 aaKnown RBP15.19■□□□□ 0.02
CKS2-201ENST00000314355 CYP2D6P10635 497 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 TDO2P48775 406 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 CTR9Q6PD62 1173 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 ZNF444Q8N0Y2 327 aaPredicted RBP15.19■□□□□ 0.02
CKS2-201ENST00000314355 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 SLC5A4Q9NY91 659 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 LOC285556D6RIA3 1793 aa15.19■□□□□ 0.02
CKS2-201ENST00000314355 GUCY1A2P33402 732 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 AAMPQ13685 434 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 SLFNL1Q499Z3 407 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 MB21D1Q8N884 522 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 STRBPQ96SI9 672 aaKnown RBP15.18■□□□□ 0.02
CKS2-201ENST00000314355 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
CKS2-201ENST00000314355 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
CKS2-201ENST00000314355 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
CKS2-201ENST00000314355 SLC15A5A6NIM6 579 aa15.17■□□□□ 0.02
CKS2-201ENST00000314355 STRNO43815 780 aa15.17■□□□□ 0.02
CKS2-201ENST00000314355 EVI5O60447 810 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms