RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 BRF1Q92994 677 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 TMEM87BQ96K49 555 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 LARP6Q9BRS8 491 aaKnown RBP23.23■■□□□ 1.31
PPM1D-204ENST00000629650 SWAP70Q9UH65 585 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 LIMCH1Q9UPQ0 1083 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 ANGEL2Q5VTE6 544 aaKnown RBP23.22■■□□□ 1.31
PPM1D-204ENST00000629650 FOXP4Q8IVH2 680 aaPredicted RBP23.22■■□□□ 1.31
PPM1D-204ENST00000629650 FBXL16Q8N461 479 aa23.22■■□□□ 1.31
PPM1D-204ENST00000629650 AGXT2Q9BYV1 514 aa23.22■■□□□ 1.31
PPM1D-204ENST00000629650 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
PPM1D-204ENST00000629650 TSPY2A6NKD2 308 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 RASA1P20936 1047 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 SART3Q15020 963 aaKnown RBP23.21■■□□□ 1.31
PPM1D-204ENST00000629650 FAM47AQ5JRC9 791 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 ZKSCAN3Q9BRR0 538 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 UBAC1Q9BSL1 405 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 TRIM34Q9BYJ4 488 aa23.21■■□□□ 1.31
PPM1D-204ENST00000629650 PASKQ96RG2 1323 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 IFIT3O14879 490 aaKnown RBP23.2■■□□□ 1.3
PPM1D-204ENST00000629650 RASA3Q14644 834 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 APOBEC3FQ8IUX4 373 aaKnown RBP23.2■■□□□ 1.3
PPM1D-204ENST00000629650 TMX3Q96JJ7 454 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 MTA3Q9BTC8 594 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 GGA3Q9NZ52 723 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 TAOK2Q9UL54 1235 aa23.2■■□□□ 1.3
PPM1D-204ENST00000629650 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
PPM1D-204ENST00000629650 ERICH2A1L162 156 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 SH2B2O14492 632 aaPredicted RBP23.19■■□□□ 1.3
PPM1D-204ENST00000629650 TFAP4Q01664 338 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 TMEM67Q5HYA8 995 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 IQCA1Q86XH1 822 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 IGDCC4Q8TDY8 1250 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 GPHNQ9NQX3 736 aaPredicted RBP23.19■■□□□ 1.3
PPM1D-204ENST00000629650 TPCN1Q9ULQ1 816 aa23.19■■□□□ 1.3
PPM1D-204ENST00000629650 ANGEL1Q9UNK9 670 aaKnown RBP23.19■■□□□ 1.3
PPM1D-204ENST00000629650 TSPY3P0CV98 308 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 TSPY8P0CW00 308 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 ZSCAN31Q96LW9 406 aaPredicted RBP23.18■■□□□ 1.3
PPM1D-204ENST00000629650 ZSCAN10Q96SZ4 725 aaPredicted RBP23.18■■□□□ 1.3
PPM1D-204ENST00000629650 DNAJC18Q9H819 358 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 POLR2AP24928 1970 aaKnown RBP23.18■■□□□ 1.3
PPM1D-204ENST00000629650 FAM196BA6NMK8 535 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 SHMT1P34896 483 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 FMR1Q06787 632 aaKnown RBP eCLIP23.18■■□□□ 1.3
PPM1D-204ENST00000629650 APOBRQ0VD83 1088 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 METTL16Q86W50 562 aaKnown RBP23.18■■□□□ 1.3
PPM1D-204ENST00000629650 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
PPM1D-204ENST00000629650 TNKSO95271 1327 aa23.17■■□□□ 1.3
PPM1D-204ENST00000629650 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
PPM1D-204ENST00000629650 CDAN1Q8IWY9 1227 aa23.17■■□□□ 1.3
PPM1D-204ENST00000629650 DEFB129Q9H1M3 183 aa23.17■■□□□ 1.3
PPM1D-204ENST00000629650 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
PPM1D-204ENST00000629650 HERC5Q9UII4 1024 aaKnown RBP23.17■■□□□ 1.3
PPM1D-204ENST00000629650 PITPNM2Q9BZ72 1349 aa23.16■■□□□ 1.3
PPM1D-204ENST00000629650 LARGE1O95461 756 aa23.16■■□□□ 1.3
PPM1D-204ENST00000629650 LIFRP42702 1097 aa23.16■■□□□ 1.3
PPM1D-204ENST00000629650 WTAPQ15007 396 aa23.16■■□□□ 1.3
PPM1D-204ENST00000629650 ME3Q16798 604 aa23.16■■□□□ 1.3
PPM1D-204ENST00000629650 SH2B1Q9NRF2 756 aaPredicted RBP23.16■■□□□ 1.3
PPM1D-204ENST00000629650 NMT2O60551 498 aa23.15■■□□□ 1.3
PPM1D-204ENST00000629650 HSP90AA1P07900 732 aaKnown RBP23.15■■□□□ 1.3
PPM1D-204ENST00000629650 NEDD1Q8NHV4 660 aa23.15■■□□□ 1.3
PPM1D-204ENST00000629650 KLRG1Q96E93 195 aa23.15■■□□□ 1.3
PPM1D-204ENST00000629650 TEPSINQ96N21 525 aa23.15■■□□□ 1.3
PPM1D-204ENST00000629650 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
PPM1D-204ENST00000629650 EVCP57679 992 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 SEC23AQ15436 765 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 TATDN1Q6P1N9 297 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 NFXL1Q6ZNB6 911 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 TMTC2Q8N394 836 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 ENAHQ8N8S7 591 aaPredicted RBP23.14■■□□□ 1.3
PPM1D-204ENST00000629650 SENP2Q9HC62 589 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 CREBZFQ9NS37 354 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 TCP11L1Q9NUJ3 509 aa23.14■■□□□ 1.3
PPM1D-204ENST00000629650 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.3
PPM1D-204ENST00000629650 KLF18A0A0U1RQI7 1052 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 CCDC69A6NI79 296 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 TRAF5O00463 557 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 AKR1B1P15121 316 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 CCDC178Q5BJE1 867 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 SGMS1Q86VZ5 419 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 SPRYD3Q8NCJ5 442 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 DCPSQ96C86 337 aaKnown RBP23.13■■□□□ 1.29
PPM1D-204ENST00000629650 ZNF274Q96GC6 653 aaPredicted RBP23.13■■□□□ 1.29
PPM1D-204ENST00000629650 CCDC17Q96LX7 622 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 IL17RBQ9NRM6 502 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 BRPF3Q9ULD4 1205 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 PPP2R3BQ9Y5P8 575 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 GREB1LQ9C091 1923 aaPredicted RBP23.13■■□□□ 1.29
PPM1D-204ENST00000629650 PLIN4Q96Q06 1357 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 TBC1D12O60347 775 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 STK3Q13188 491 aa23.13■■□□□ 1.29
PPM1D-204ENST00000629650 CERKLQ49MI3 558 aaPredicted RBP23.13■■□□□ 1.29
PPM1D-204ENST00000629650 IFIT1BQ5T764 474 aaKnown RBP23.13■■□□□ 1.29
PPM1D-204ENST00000629650 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
PPM1D-204ENST00000629650 CUL4AQ13619 759 aa23.12■■□□□ 1.29
PPM1D-204ENST00000629650 MIGA2Q7L4E1 593 aa23.12■■□□□ 1.29
PPM1D-204ENST00000629650 GLIS2Q9BZE0 524 aaPredicted RBP23.12■■□□□ 1.29
PPM1D-204ENST00000629650 SLKQ9H2G2 1235 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms