RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 TGFBRAP1Q8WUH2 860 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 USP28Q96RU2 1077 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 SENP2Q9HC62 589 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 GUCY1B3Q02153 619 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 TROAPQ12815 778 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 NBPF11Q86T75 865 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 PHKBQ93100 1093 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 TNMDQ9H2S6 317 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 BRMS1Q9HCU9 246 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 FOCADQ5VW36 1801 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 MYO3BQ8WXR4 1341 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 MMP1P03956 469 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 RXRAP19793 462 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 EZH2Q15910 746 aaKnown RBP18.92■□□□□ 0.62
LDB3-208ENST00000623007 RAB11FIP4Q86YS3 637 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 CCDC144CPQ8IYA2 1237 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 LINC00301Q8NCQ3 95 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 NKX2-3Q8TAU0 364 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
LDB3-208ENST00000623007 LZTS2Q9BRK4 669 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 MYL10Q9BUA6 226 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 KAT14Q9H8E8 782 aa18.92■□□□□ 0.62
LDB3-208ENST00000623007 DDX60LQ5H9U9 1706 aaKnown RBP18.92■□□□□ 0.62
LDB3-208ENST00000623007 CYP2D7A0A087X1C5 515 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 DTNBO60941 627 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 PPP6R2O75170 966 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 ME1P48163 572 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 RILPL1Q5EBL4 403 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 RBM43Q6ZSC3 357 aaKnown RBP18.91■□□□□ 0.62
LDB3-208ENST00000623007 C16orf86Q6ZW13 317 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 CLSTN2Q9H4D0 955 aa18.91■□□□□ 0.62
LDB3-208ENST00000623007 MORC2Q9Y6X9 1032 aaPredicted RBP18.91■□□□□ 0.62
LDB3-208ENST00000623007 SPTLC2O15270 562 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 FOSBP53539 338 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 FAM160A1Q05DH4 1040 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 STRIP1Q5VSL9 837 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 PGBD1Q96JS3 809 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 PPP1R9BQ96SB3 815 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 RBSNQ9H1K0 784 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 DACT1Q9NYF0 836 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 SWAP70Q9UH65 585 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 CEP131Q9UPN4 1083 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 CDK5RAP2Q96SN8 1893 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 FLT1P17948 1338 aa18.9■□□□□ 0.62
LDB3-208ENST00000623007 ECM29Q5VYK3 1845 aa18.89■□□□□ 0.62
LDB3-208ENST00000623007 RIMBP2O15034 1052 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 PRDM1O75626 825 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 RHBDL3P58872 404 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 TFAP4Q01664 338 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 EN1Q05925 392 aaPredicted RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 TMTC3Q6ZXV5 915 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 NOSTRINQ8IVI9 506 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 MRPS27Q92552 414 aaKnown RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 TRIM44Q96DX7 344 aaPredicted RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 VPS33BQ9H267 617 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 DAGLAQ9Y4D2 1042 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 BMP15O95972 392 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 SLC39A14Q15043 492 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
LDB3-208ENST00000623007 CCAR1Q8IX12 1150 aaKnown RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.89■□□□□ 0.61
LDB3-208ENST00000623007 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
LDB3-208ENST00000623007 MSL1Q68DK7 614 aa18.88■□□□□ 0.61
LDB3-208ENST00000623007 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
LDB3-208ENST00000623007 MYH6P13533 1939 aa18.88■□□□□ 0.61
LDB3-208ENST00000623007 C10orf71Q711Q0 1435 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 MYH1P12882 1939 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
LDB3-208ENST00000623007 CYP2D6P10635 497 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 GRIK5Q16478 980 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 HS1BP3Q53T59 392 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 MAPKAPK5Q8IW41 473 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 NEDD1Q8NHV4 660 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 SH3GLB2Q9NR46 395 aa18.87■□□□□ 0.61
LDB3-208ENST00000623007 LIG1P18858 919 aa18.86■□□□□ 0.61
LDB3-208ENST00000623007 SASS6Q6UVJ0 657 aa18.86■□□□□ 0.61
LDB3-208ENST00000623007 FUCA2Q9BTY2 467 aa18.86■□□□□ 0.61
LDB3-208ENST00000623007 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
LDB3-208ENST00000623007 PLIN4Q96Q06 1357 aa18.86■□□□□ 0.61
LDB3-208ENST00000623007 HLA-DOAP06340 250 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 CMA1P23946 247 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 CALML3P27482 149 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 CDK8P49336 464 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 CEBPZQ03701 1054 aaKnown RBP18.85■□□□□ 0.61
LDB3-208ENST00000623007 FUT2Q10981 343 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 FAM47AQ5JRC9 791 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
LDB3-208ENST00000623007 DIS3L2Q8IYB7 885 aaKnown RBP18.85■□□□□ 0.61
LDB3-208ENST00000623007 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms