RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
SMCHD1-205ENST00000581383 ATG4DQ86TL0 474 aaPredicted RBP7.59□□□□□ -1.19
SMCHD1-205ENST00000581383 METTL16Q86W50 562 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-205ENST00000581383 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
SMCHD1-205ENST00000581383 METTL5Q9NRN9 209 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-205ENST00000581383 ERCC5P28715 1186 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 ST13P50502 369 aaKnown RBP7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 ZP2Q05996 745 aa7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
SMCHD1-205ENST00000581383 LRIG2O94898 1065 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 PAPLNO95428 1278 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 SV2BQ7L1I2 683 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 SLC38A3Q99624 504 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 MIPEPQ99797 713 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 MBNL3Q9NUK0 354 aaKnown RBP7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 PLAGL2Q9UPG8 496 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 U3KQE9 123 aa7.57□□□□□ -1.2
SMCHD1-205ENST00000581383 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 LCE4AQ5TA78 99 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 CDKAL1Q5VV42 579 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 SCARA3Q6AZY7 606 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 PLPPR2Q96GM1 343 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 PRDM7Q9NQW5 492 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 GGT7Q9UJ14 662 aa7.56□□□□□ -1.2
SMCHD1-205ENST00000581383 FARP2O94887 1054 aaPredicted RBP7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 C8AP07357 584 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 INPP5AQ14642 412 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 MAP3K11Q16584 847 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 WIPI1Q5MNZ9 446 aaPredicted RBP7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 SFRP5Q5T4F7 317 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 ZNF648Q5T619 568 aaPredicted RBP7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 XAGE3Q8WTP9 111 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 ADAMTS6Q9UKP5 1117 aa7.55□□□□□ -1.2
SMCHD1-205ENST00000581383 F6X3S4 739 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 CBX7O95931 251 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 CLCN7P51798 805 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 NOC4LQ9BVI4 516 aaKnown RBP7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 MAPK8IP1Q9UQF2 711 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 PCDHGB7Q9Y5F8 929 aa7.54□□□□□ -1.2
SMCHD1-205ENST00000581383 CYP7A1P22680 504 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 RASIP1Q5U651 963 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 HID1Q8IV36 788 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 MFSD2AQ8NA29 543 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
SMCHD1-205ENST00000581383 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 MPZL3Q6UWV2 235 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 ERMP1Q7Z2K6 904 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 ANKRD24Q8TF21 1146 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 TMEM40Q8WWA1 233 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 MIR1-1HGQ9H1L0 117 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 TNKS2Q9H2K2 1166 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 DDX41Q9UJV9 622 aaKnown RBP7.52□□□□□ -1.21
SMCHD1-205ENST00000581383 H3BS24 57 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 EOMESO95936 686 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 GRK4P32298 578 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 AFMP43652 599 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 RACK1P63244 317 aaKnown RBP7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 RING1Q06587 406 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 SEPT6Q14141 434 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 LETMD1Q6P1Q0 360 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 ZSWIM9Q86XI8 627 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 WFDC3Q8IUB2 231 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 HSPA12BQ96MM6 686 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 TGIF2Q9GZN2 237 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 CARS2Q9HA77 564 aaKnown RBP7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 KBTBD4Q9NVX7 518 aa7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.51□□□□□ -1.21
SMCHD1-205ENST00000581383 MINDY4BA8MYZ0 360 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 SLITRK5O94991 958 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 NTF4P34130 210 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 ZNF124Q15973 351 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 NKPD1Q17RQ9 610 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 RELL1Q8IUW5 271 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
SMCHD1-205ENST00000581383 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms