RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 SHOX2O60902 331 aaPredicted RBP7.35□□□□□ -1.23
IDH3A-206ENST00000558535 MTRF1O75570 445 aaKnown RBP7.35□□□□□ -1.23
IDH3A-206ENST00000558535 RPL17P18621 184 aaKnown RBP7.35□□□□□ -1.23
IDH3A-206ENST00000558535 ZSCAN25Q6NSZ9 544 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 MAMSTRQ6ZN01 415 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 PEX5LQ8IYB4 626 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 DDX12PQ92771 950 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 P3H4Q92791 437 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 KAT2BQ92831 832 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 GORASP1Q9BQQ3 440 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 YIPF2Q9BWQ6 316 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 FUT8Q9BYC5 575 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 METTL14Q9HCE5 456 aaKnown RBP7.35□□□□□ -1.23
IDH3A-206ENST00000558535 TMCO1Q9UM00 188 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 COMMD10Q9Y6G5 202 aa7.35□□□□□ -1.23
IDH3A-206ENST00000558535 GBP2P32456 591 aaPredicted RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 CCT6AP40227 531 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 NLRP5P59047 1200 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 SNCBQ16143 134 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 LCA5Q86VQ0 697 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 FLAD1Q8NFF5 587 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 LMBR1Q8WVP7 490 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 EPAS1Q99814 870 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 NACA2Q9H009 215 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 BRD8Q9H0E9 1235 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PAIP2BQ9ULR5 123 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PDZRN3Q9UPQ7 1066 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 TARSL2A2RTX5 802 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 ST18O60284 1047 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 STK10O94804 968 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PYGLP06737 847 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 CCDC166P0CW27 439 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 CCDC192P0DO97 292 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 CNGA1P29973 690 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 USP5P45974 858 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 USP11P51784 963 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 ZBED6P86452 979 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 Q4G0T1 1027 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PARP9Q8IXQ6 854 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 FOXD4L4Q8WXT5 416 aaPredicted RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 RSPH1Q8WYR4 309 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 SMARCC1Q92922 1105 aaPredicted RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 INTS4Q96HW7 963 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 SH3GL1Q99961 368 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 PAPOLBQ9NRJ5 636 aaKnown RBP7.34□□□□□ -1.23
IDH3A-206ENST00000558535 KLC4Q9NSK0 619 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 ZNF148Q9UQR1 794 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 FAM169AQ9Y6X4 670 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 ANKRD26Q9UPS8 1709 aa7.34□□□□□ -1.23
IDH3A-206ENST00000558535 MYOM1P52179 1685 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 CCDC162PA2VCL2 907 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 ZEB2O60315 1214 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 TROVE2P10155 538 aaKnown RBP eCLIP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 FOSL1P15407 271 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 RANBP1P43487 201 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 FNTAP49354 379 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 MPP3Q13368 585 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 CUL4BQ13620 913 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 NAA25Q14CX7 972 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 BMP2KLQ5H9B9 411 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 MIS18BP1Q6P0N0 1132 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 RPAP2Q8IXW5 612 aaPredicted RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 LRRC43Q8N309 656 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 TEKT4Q8WW24 435 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 GIMAP1Q8WWP7 306 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 ZBTB10Q96DT7 871 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 PCDH18Q9HCL0 1135 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 SUGT1Q9Y2Z0 365 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 MEGF6O75095 1541 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 EME2A4GXA9 379 aaPredicted RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 GOLGA6L4A6NEF3 574 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 EVI5O60447 810 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 ATP5JP18859 108 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 NKX1-1Q15270 411 aaPredicted RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 C17orf53Q8N3J3 647 aaPredicted RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 AKT1S1Q96B36 256 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 IWS1Q96ST2 819 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 TCHPQ9BT92 498 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
IDH3A-206ENST00000558535 HOXC10Q9NYD6 342 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 SPG7Q9UQ90 795 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 BTAF1O14981 1849 aa7.33□□□□□ -1.24
IDH3A-206ENST00000558535 TMEM221A6NGB7 291 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 BCRP11274 1271 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 PHEXP78562 749 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 INF2Q27J81 1249 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 ERCC6LQ2NKX8 1250 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 MYSM1Q5VVJ2 828 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 SARM1Q6SZW1 724 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 ARMC9Q7Z3E5 817 aa7.32□□□□□ -1.24
IDH3A-206ENST00000558535 DDX54Q8TDD1 881 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms