RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 UPK3BL1B0FP48 263 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 UPK3BL2E5RIL1 263 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 DNAJA2O60884 412 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 H2AFB2P0C5Z0 115 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
TRA2A-210ENST00000497730 RSPO4Q2I0M5 234 aaPredicted RBP9.05□□□□□ -0.96
TRA2A-210ENST00000497730 XP32Q5T750 250 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 SEZ6L2Q6UXD5 910 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 FBXL6Q8N531 539 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 TBC1D32Q96NH3 1257 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 CRBNQ96SW2 442 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 SRRTQ9BXP5 876 aaKnown RBP9.05□□□□□ -0.96
TRA2A-210ENST00000497730 ANTXR1Q9H6X2 564 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 C1GALT1Q9NS00 363 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 GMIPQ9P107 970 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 PRKAG2Q9UGJ0 569 aa9.05□□□□□ -0.96
TRA2A-210ENST00000497730 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
TRA2A-210ENST00000497730 IMPDH2P12268 514 aa9.04□□□□□ -0.96
TRA2A-210ENST00000497730 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
TRA2A-210ENST00000497730 OVOS1Q6IE37 1185 aa9.04□□□□□ -0.96
TRA2A-210ENST00000497730 TANGO6Q9C0B7 1094 aa9.04□□□□□ -0.96
TRA2A-210ENST00000497730 SLC22A31A6NKX4 558 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 LRIG2O94898 1065 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
TRA2A-210ENST00000497730 SSBP05455 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRA2A-210ENST00000497730 FURINP09958 794 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 CAP2P40123 477 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
TRA2A-210ENST00000497730 LRRFIP1Q32MZ4 808 aaKnown RBP9.03□□□□□ -0.96
TRA2A-210ENST00000497730 ARSHQ5FYA8 562 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 RNF43Q68DV7 783 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 TMEM40Q8WWA1 233 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 GMLQ99445 158 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 STRIP2Q9ULQ0 834 aa9.03□□□□□ -0.96
TRA2A-210ENST00000497730 DYRK3O43781 588 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 FGRP09769 529 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 FSTP19883 344 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 ADMP35318 185 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 NFIAQ12857 509 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 TOP6BLQ8N6T0 577 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 MIPEPQ99797 713 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
TRA2A-210ENST00000497730 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 RAG1P15918 1043 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 PHACTR4Q8IZ21 702 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 SHISA5Q8N114 240 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 GIMAP7Q8NHV1 300 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 ATG4CQ96DT6 458 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 PSMG3-AS1Q96PY0 264 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 PRDM10Q9NQV6 1147 aa9.01□□□□□ -0.97
TRA2A-210ENST00000497730 LEFTY1O75610 366 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 NLRC3Q7RTR2 1065 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 LSRQ86X29 649 aaPredicted RBP9□□□□□ -0.97
TRA2A-210ENST00000497730 MFSD2AQ8NA29 543 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 GATA6Q92908 595 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 SHDQ96IW2 340 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 DBNDD2Q9BQY9 259 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 DUSP23Q9BVJ7 150 aa9□□□□□ -0.97
TRA2A-210ENST00000497730 MEIS3P2A8K0S8 358 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 IGLV1-40P01703 118 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
TRA2A-210ENST00000497730 LETMD1Q6P1Q0 360 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 RUFY4Q6ZNE9 571 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 CYB5D2Q8WUJ1 264 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 SREK1Q8WXA9 508 aaKnown RBP8.99□□□□□ -0.97
TRA2A-210ENST00000497730 KIF2CQ99661 725 aa8.99□□□□□ -0.97
TRA2A-210ENST00000497730 PPP1R1BQ9UD71 204 aaPredicted RBP8.99□□□□□ -0.97
TRA2A-210ENST00000497730 FAM170BA6NMN3 283 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 GSC2O15499 205 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 SLITRK5O94991 958 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 ATP2B1P20020 1258 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 GIPRP48546 466 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 CDCP2Q5VXM1 449 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 ZNF765Q7L2R6 523 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 RBBP8NLQ8NC74 664 aaPredicted RBP8.98□□□□□ -0.97
TRA2A-210ENST00000497730 CCDC74BQ96LY2 380 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 CNNM2Q9H8M5 875 aa8.98□□□□□ -0.97
TRA2A-210ENST00000497730 FAM86C2PA6NEL3 165 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 F13BP05160 661 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 NME1P15531 152 aaKnown RBP8.97□□□□□ -0.97
TRA2A-210ENST00000497730 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
TRA2A-210ENST00000497730 OGFOD3Q6PK18 319 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 OR6P1Q8NGX9 317 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 SHKBP1Q8TBC3 707 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 BAHD1Q8TBE0 780 aaPredicted RBP8.97□□□□□ -0.97
TRA2A-210ENST00000497730 TM9SF2Q99805 663 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 ZNF408Q9H9D4 720 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 ATG3Q9NT62 314 aa8.97□□□□□ -0.97
TRA2A-210ENST00000497730 GBP1P32455 592 aa8.96□□□□□ -0.98
TRA2A-210ENST00000497730 GTF2F1P35269 517 aaKnown RBP eCLIP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms