RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 INTS5Q6P9B9 1019 aaKnown RBP6.56□□□□□ -1.36
SSR1-209ENST00000488834 MFSD2AQ8NA29 543 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 FAM13CQ8NE31 585 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 GATA6Q92908 595 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
SSR1-209ENST00000488834 BRMS1Q9HCU9 246 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 KCNQ5Q9NR82 932 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 REV1Q9UBZ9 1251 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
SSR1-209ENST00000488834 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.56□□□□□ -1.36
SSR1-209ENST00000488834 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 HTR3BO95264 441 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 FOSL1P15407 271 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 ERCC5P28715 1186 aaPredicted RBP6.55□□□□□ -1.36
SSR1-209ENST00000488834 CRKP46108 304 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 RACK1P63244 317 aaKnown RBP6.55□□□□□ -1.36
SSR1-209ENST00000488834 SLBPQ14493 270 aaKnown RBP eCLIP6.55□□□□□ -1.36
SSR1-209ENST00000488834 SLC6A19Q695T7 634 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 GK5Q6ZS86 529 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 METTL16Q86W50 562 aaKnown RBP6.55□□□□□ -1.36
SSR1-209ENST00000488834 NT5C1AQ9BXI3 368 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 PCMTD2Q9NV79 361 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 TJP2Q9UDY2 1190 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 PCDHB14Q9Y5E9 798 aa6.55□□□□□ -1.36
SSR1-209ENST00000488834 PRR19A6NJB7 356 aa6.54□□□□□ -1.36
SSR1-209ENST00000488834 HYAL3O43820 417 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 CST3P01034 146 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 CAP2P40123 477 aa6.54□□□□□ -1.36
SSR1-209ENST00000488834 ZNF165P49910 485 aa6.54□□□□□ -1.36
SSR1-209ENST00000488834 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 LETMD1Q6P1Q0 360 aa6.54□□□□□ -1.36
SSR1-209ENST00000488834 MCATQ8IVS2 390 aaKnown RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 ACSF2Q96CM8 615 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 PSMG3-AS1Q96PY0 264 aa6.54□□□□□ -1.36
SSR1-209ENST00000488834 PRDM5Q9NQX1 630 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 POLR3KQ9Y2Y1 108 aaPredicted RBP6.54□□□□□ -1.36
SSR1-209ENST00000488834 GNAT3A8MTJ3 354 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 TNNI2P48788 182 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 FBXW10Q5XX13 1052 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 PHACTR4Q8IZ21 702 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 FAM181AQ8N9Y4 354 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
SSR1-209ENST00000488834 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
SSR1-209ENST00000488834 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 SLITRK5O94991 958 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 ITIH2P19823 946 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 CYP7A1P22680 504 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 HOXA10P31260 410 aaPredicted RBP6.52□□□□□ -1.37
SSR1-209ENST00000488834 PAK2Q13177 524 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 LRP8Q14114 963 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 TMEM201Q5SNT2 666 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 FERD3LQ96RJ6 166 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 TGIF2Q9GZN2 237 aa6.52□□□□□ -1.37
SSR1-209ENST00000488834 PRR36Q9H6K5 1346 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 UPK3BL1B0FP48 263 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 UPK3BL2E5RIL1 263 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 ETV3P41162 512 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 REXO1Q8N1G1 1221 aaKnown RBP6.51□□□□□ -1.37
SSR1-209ENST00000488834 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 SPATA32Q96LK8 384 aa6.51□□□□□ -1.37
SSR1-209ENST00000488834 ANGEL1Q9UNK9 670 aaKnown RBP6.51□□□□□ -1.37
SSR1-209ENST00000488834 FAM155AB1AL88 458 aaPredicted RBP6.5□□□□□ -1.37
SSR1-209ENST00000488834 CHURC1-FNTBB4DL54 471 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 RAG1P15918 1043 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 CD97P48960 835 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 CLCQ05315 142 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 GNL2Q13823 731 aaKnown RBP6.5□□□□□ -1.37
SSR1-209ENST00000488834 SFRP5Q5T4F7 317 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 SLITRK4Q8IW52 837 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 CYB5D2Q8WUJ1 264 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 ACBD3Q9H3P7 528 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 ZFP64Q9NPA5 681 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 GMIPQ9P107 970 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 ZC3H7BQ9UGR2 993 aaKnown RBP6.5□□□□□ -1.37
SSR1-209ENST00000488834 MAPK8IP1Q9UQF2 711 aa6.5□□□□□ -1.37
SSR1-209ENST00000488834 CBX7O95931 251 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 EOMESO95936 686 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 IMPDH2P12268 514 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 GBP1P32455 592 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 LRRFIP1Q32MZ4 808 aaKnown RBP6.49□□□□□ -1.37
SSR1-209ENST00000488834 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 SLFN12Q8IYM2 578 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 RIN3Q8TB24 985 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 NETO1Q8TDF5 533 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 CCDC74BQ96LY2 380 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 CRBNQ96SW2 442 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 EHMT1Q9H9B1 1298 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 BSDC1Q9NW68 430 aaPredicted RBP6.49□□□□□ -1.37
SSR1-209ENST00000488834 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
SSR1-209ENST00000488834 IGF2BP3O00425 579 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSR1-209ENST00000488834 ATE1O95260 518 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 CEACAM5P06731 702 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms