RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.18■■□□□ 1.94
SREBF1-208ENST00000469356 ZKSCAN4Q969J2 545 aaPredicted RBP27.18■■□□□ 1.94
SREBF1-208ENST00000469356 MPHOSPH10O00566 681 aaKnown RBP27.17■■□□□ 1.94
SREBF1-208ENST00000469356 ORC4O43929 436 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 ZNF157P51786 506 aaPredicted RBP27.17■■□□□ 1.94
SREBF1-208ENST00000469356 EVX2Q03828 476 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 DEFB115Q30KQ5 88 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 SLC44A5Q8NCS7 719 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 CCDC102AQ96A19 550 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 KRT23Q9C075 422 aa27.17■■□□□ 1.94
SREBF1-208ENST00000469356 CYP21A2P08686 494 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 FGRP09769 529 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 SLURP2P0DP57 97 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 NECTIN1Q15223 517 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 PPP4R3BQ5MIZ7 849 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 CREB3L3Q68CJ9 461 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 TMEM179Q6ZVK1 233 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 ERO1BQ86YB8 467 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 AS3MTQ9HBK9 375 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 DOCK1Q14185 1865 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 GDF11O95390 407 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 RASA1P20936 1047 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 ECE1P42892 770 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 C8orf34Q49A92 452 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 PAXIP1Q6ZW49 1069 aaPredicted RBP27.16■■□□□ 1.94
SREBF1-208ENST00000469356 ESR2Q92731 530 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 ELP3Q9H9T3 547 aa27.16■■□□□ 1.94
SREBF1-208ENST00000469356 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.16■■□□□ 1.94
SREBF1-208ENST00000469356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.16■■□□□ 1.94
SREBF1-208ENST00000469356 OTOFQ9HC10 1997 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 ATAD5Q96QE3 1844 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 RASSF10A6NK89 507 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 TSPY2A6NKD2 308 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 USP17L5A8MUK1 530 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 SLC27A2O14975 620 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 RANBP6O60518 1105 aaKnown RBP27.15■■□□□ 1.94
SREBF1-208ENST00000469356 TSPY3P0CV98 308 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 TSPY8P0CW00 308 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 PPATQ06203 517 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 KRT32Q14532 448 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 RRP12Q5JTH9 1297 aaKnown RBP27.15■■□□□ 1.94
SREBF1-208ENST00000469356 RALYLQ86SE5 291 aaKnown RBP27.15■■□□□ 1.94
SREBF1-208ENST00000469356 USP26Q9BXU7 913 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 UPF2Q9HAU5 1272 aaKnown RBP27.15■■□□□ 1.94
SREBF1-208ENST00000469356 ZBTB21Q9ULJ3 1066 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 SNCAIPQ9Y6H5 919 aa27.15■■□□□ 1.94
SREBF1-208ENST00000469356 SMIM22K7EJ46 135 aa27.14■■□□□ 1.93
SREBF1-208ENST00000469356 PRDM1O75626 825 aa27.14■■□□□ 1.93
SREBF1-208ENST00000469356 GH2P01242 217 aa27.14■■□□□ 1.93
SREBF1-208ENST00000469356 CLMNQ96JQ2 1002 aa27.14■■□□□ 1.93
SREBF1-208ENST00000469356 SPDYE5A6NIY4 337 aa27.13■■□□□ 1.93
SREBF1-208ENST00000469356 CCDC178Q5BJE1 867 aa27.13■■□□□ 1.93
SREBF1-208ENST00000469356 TBC1D10CQ8IV04 446 aa27.13■■□□□ 1.93
SREBF1-208ENST00000469356 NCOA7Q8NI08 942 aa27.13■■□□□ 1.93
SREBF1-208ENST00000469356 ZBTB48P10074 688 aaPredicted RBP27.12■■□□□ 1.93
SREBF1-208ENST00000469356 AKR1B1P15121 316 aa27.12■■□□□ 1.93
SREBF1-208ENST00000469356 PTPRAP18433 802 aa27.12■■□□□ 1.93
SREBF1-208ENST00000469356 HSPA4P34932 840 aa27.12■■□□□ 1.93
SREBF1-208ENST00000469356 TFAP4Q01664 338 aa27.12■■□□□ 1.93
SREBF1-208ENST00000469356 RAB3GAP1Q15042 981 aa27.12■■□□□ 1.93
SREBF1-208ENST00000469356 E7EWF7 191 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 RRP1BQ14684 758 aaKnown RBP27.11■■□□□ 1.93
SREBF1-208ENST00000469356 TSGA10IPQ3SY00 556 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 NEDD1Q8NHV4 660 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 OPTNQ96CV9 577 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 KANSL2Q9H9L4 492 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 ZHX2Q9Y6X8 837 aa27.11■■□□□ 1.93
SREBF1-208ENST00000469356 PPIL2Q13356 520 aa27.1■■□□□ 1.93
SREBF1-208ENST00000469356 IQCA1Q86XH1 822 aa27.1■■□□□ 1.93
SREBF1-208ENST00000469356 WNK4Q96J92 1243 aa27.1■■□□□ 1.93
SREBF1-208ENST00000469356 NBPF3Q9H094 633 aa27.1■■□□□ 1.93
SREBF1-208ENST00000469356 SLC10A3P09131 477 aa27.09■■□□□ 1.93
SREBF1-208ENST00000469356 OTUD5Q96G74 571 aa27.09■■□□□ 1.93
SREBF1-208ENST00000469356 SH2D4AQ9H788 454 aa27.09■■□□□ 1.93
SREBF1-208ENST00000469356 ARHGEF10LQ9HCE6 1279 aa27.09■■□□□ 1.93
SREBF1-208ENST00000469356 SEPT2Q15019 361 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 FAM47AQ5JRC9 791 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 SPRYD7Q5W111 196 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 RASAL3Q86YV0 1011 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 ZNF280CQ8ND82 737 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 WDR18Q9BV38 432 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 INCENPQ9NQS7 918 aa27.08■■□□□ 1.93
SREBF1-208ENST00000469356 PLIN4Q96Q06 1357 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 B4E1Z4 1266 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 CXCL11O14625 94 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 PSMA5P28066 241 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 ICA1Q05084 483 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 NOGQ13253 232 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 KCNB2Q92953 911 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 TCP11L1Q9NUJ3 509 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 NEDD4P46934 1319 aa27.07■■□□□ 1.92
SREBF1-208ENST00000469356 KDM4AO75164 1064 aa27.06■■□□□ 1.92
SREBF1-208ENST00000469356 HMGB1P09429 215 aaKnown RBP27.06■■□□□ 1.92
SREBF1-208ENST00000469356 SART3Q15020 963 aaKnown RBP27.06■■□□□ 1.92
SREBF1-208ENST00000469356 REM2Q8IYK8 340 aaPredicted RBP27.06■■□□□ 1.92
SREBF1-208ENST00000469356 CAPNS2Q96L46 248 aa27.06■■□□□ 1.92
SREBF1-208ENST00000469356 ERICH2A1L162 156 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 C19orf81C9J6K1 198 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 GTF2A2P52657 109 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 GRM1Q13255 1194 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms