RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PDS5AQ29RF7 1337 aaKnown RBP15.76■□□□□ 0.11
CLK3-203ENST00000454830 USP17L3A6NCW0 530 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 USP17L4A6NCW7 530 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 USP17L1Q7RTZ2 530 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 ZNF830Q96NB3 372 aaPredicted RBP15.76■□□□□ 0.11
CLK3-203ENST00000454830 MXD3Q9BW11 206 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 TRIM5Q9C035 493 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 SBF2Q86WG5 1849 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 TAF1LQ8IZX4 1826 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 MYH2Q9UKX2 1941 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 MROH7-TTC4A0A0A0MT08 1334 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 HMGB2P26583 209 aaKnown RBP15.75■□□□□ 0.11
CLK3-203ENST00000454830 SLF2Q8IX21 1173 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 CALM1P0DP23 149 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 CALM2P0DP24 149 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 CALM3P0DP25 149 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLK3-203ENST00000454830 CBX8Q9HC52 389 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 BRMS1Q9HCU9 246 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 CTAGE5O15320 804 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 MMP1P03956 469 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 PDE6BP35913 854 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 OXER1Q8TDS5 423 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 FUCA2Q9BTY2 467 aa15.75■□□□□ 0.11
CLK3-203ENST00000454830 RAD21O60216 631 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 PCP11498 1178 aaKnown RBP15.74■□□□□ 0.11
CLK3-203ENST00000454830 PLCD1P51178 756 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 C12orf60Q5U649 245 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 TTF2Q9UNY4 1162 aaKnown RBP15.74■□□□□ 0.11
CLK3-203ENST00000454830 DOCK2Q92608 1830 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 NPR1P16066 1061 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 ALDH1B1P30837 517 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 C2CD5Q86YS7 1000 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 RBM28Q9NW13 759 aaKnown RBP15.74■□□□□ 0.11
CLK3-203ENST00000454830 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 SYKP43405 635 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 NLRP5P59047 1200 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 SP8Q8IXZ3 490 aa15.74■□□□□ 0.11
CLK3-203ENST00000454830 NAP1L5Q96NT1 182 aaPredicted RBP15.74■□□□□ 0.11
CLK3-203ENST00000454830 ORC4O43929 436 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 LY75O60449 1722 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 C4AP0C0L4 1744 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 PFKFB1P16118 471 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
CLK3-203ENST00000454830 PDILTQ8N807 584 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 PDLIM2Q96JY6 352 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 MTA3Q9BTC8 594 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 ATP6V0A2Q9Y487 856 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 ZNF202O95125 648 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 SRGNP10124 158 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 PNMA1Q8ND90 353 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
CLK3-203ENST00000454830 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
CLK3-203ENST00000454830 KIF5BP33176 963 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 STX1AQ16623 288 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
CLK3-203ENST00000454830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLK3-203ENST00000454830 CACNA1SQ13698 1873 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
CLK3-203ENST00000454830 TROAPQ12815 778 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 SNW1Q13573 536 aaKnown RBP15.72■□□□□ 0.11
CLK3-203ENST00000454830 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 ZNF287Q9HBT7 754 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 PLSCR1O15162 318 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
CLK3-203ENST00000454830 H0YIN7 160 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 CHD4Q14839 1912 aa15.72■□□□□ 0.11
CLK3-203ENST00000454830 DDAH1O94760 285 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 KRT2P35908 639 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 PPP2R5BQ15173 497 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 A0A1W2PQ27 194 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 A0A1W2PQ64 194 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 A0A1W2PQD8 194 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 IL1R1P14778 569 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 CHRNA5P30532 468 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 EIF6P56537 245 aaKnown RBP15.71■□□□□ 0.11
CLK3-203ENST00000454830 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 CEP57L1Q8IYX8 460 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 FMR1NBQ8N0W7 255 aaPredicted RBP15.71■□□□□ 0.11
CLK3-203ENST00000454830 EYA3Q99504 573 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 IRS2Q9Y4H2 1338 aa15.71■□□□□ 0.11
CLK3-203ENST00000454830 U2AF2P26368 475 aaKnown RBP eCLIP15.71■□□□□ 0.13e-6■■□□□ 13
CLK3-203ENST00000454830 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.1
CLK3-203ENST00000454830 TMTC3Q6ZXV5 915 aa15.71■□□□□ 0.1
CLK3-203ENST00000454830 SRBD1Q8N5C6 995 aaKnown RBP15.71■□□□□ 0.1
CLK3-203ENST00000454830 MASTLQ96GX5 879 aa15.71■□□□□ 0.1
CLK3-203ENST00000454830 PCDHB6Q9Y5E3 794 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms