RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 CMTR1Q8N1G2 835 aaKnown RBP25.8■■□□□ 1.72
VSX1-205ENST00000429762 UBE2Q2LH0YL09 131 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 SLURP2P0DP57 97 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 TCP10Q12799 353 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 RTN1Q16799 776 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 TMTC2Q8N394 836 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 CHMP4CQ96CF2 233 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 AIFM3Q96NN9 605 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 OSBPL5Q9H0X9 879 aaPredicted RBP25.8■■□□□ 1.72
VSX1-205ENST00000429762 IL17RBQ9NRM6 502 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 GJB4Q9NTQ9 266 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 LMBRD1Q9NUN5 540 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 SERPINA10Q9UK55 444 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 ZNRF3Q9ULT6 936 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 HDLBPQ00341 1268 aaKnown RBP25.79■■□□□ 1.72
VSX1-205ENST00000429762 NTRK3Q16288 839 aa25.79■■□□□ 1.72
VSX1-205ENST00000429762 ZNF444Q8N0Y2 327 aaPredicted RBP25.79■■□□□ 1.72
VSX1-205ENST00000429762 VIL1P09327 827 aaKnown RBP25.78■■□□□ 1.72
VSX1-205ENST00000429762 NCLP19338 710 aaKnown RBP25.78■■□□□ 1.72
VSX1-205ENST00000429762 DNM1Q05193 864 aaKnown RBP25.78■■□□□ 1.72
VSX1-205ENST00000429762 MRIQ9BWK5 157 aa25.78■■□□□ 1.72
VSX1-205ENST00000429762 TDRD3Q9H7E2 651 aaKnown RBP25.78■■□□□ 1.72
VSX1-205ENST00000429762 TSPY3P0CV98 308 aa25.78■■□□□ 1.72
VSX1-205ENST00000429762 TSPY8P0CW00 308 aa25.78■■□□□ 1.72
VSX1-205ENST00000429762 CCDC82Q8N4S0 544 aa25.78■■□□□ 1.72
VSX1-205ENST00000429762 NID2Q14112 1375 aa25.78■■□□□ 1.72
VSX1-205ENST00000429762 RCSD1Q6JBY9 416 aa25.77■■□□□ 1.72
VSX1-205ENST00000429762 PRMT6Q96LA8 375 aaPredicted RBP25.77■■□□□ 1.72
VSX1-205ENST00000429762 CATIPQ7Z7H3 387 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 FANCBQ8NB91 859 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 SLC26A6Q9BXS9 759 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 GZF1Q9H116 711 aaPredicted RBP25.76■■□□□ 1.72
VSX1-205ENST00000429762 VPS33BQ9H267 617 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 FAM198AQ9UFP1 575 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 KIF3AQ9Y496 699 aa25.76■■□□□ 1.72
VSX1-205ENST00000429762 CXCL9Q07325 125 aa25.76■■□□□ 1.71
VSX1-205ENST00000429762 RESTQ13127 1097 aa25.76■■□□□ 1.71
VSX1-205ENST00000429762 GMLQ99445 158 aa25.76■■□□□ 1.71
VSX1-205ENST00000429762 CDKL5O76039 1030 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 CPLX2Q6PUV4 134 aaKnown RBP25.75■■□□□ 1.71
VSX1-205ENST00000429762 FIBPO43427 364 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 PRELPP51888 382 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 TPRNQ4KMQ1 711 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 TTC6Q86TZ1 520 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 C8orf76Q96K31 380 aa25.75■■□□□ 1.71
VSX1-205ENST00000429762 ATP6V1DQ9Y5K8 247 aa25.74■■□□□ 1.71
VSX1-205ENST00000429762 MYO3BQ8WXR4 1341 aa25.74■■□□□ 1.71
VSX1-205ENST00000429762 GABPAQ06546 454 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 TROAPQ12815 778 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 USP48Q86UV5 1035 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 ALG1Q9BT22 464 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 MYH8P13535 1937 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 SHTN1A0MZ66 631 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 PLEKHA8P1O95397 391 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 GUCY1A2P33402 732 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 JDP2Q8WYK2 163 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 ZNF287Q9HBT7 754 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 MTMR7Q9Y216 660 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 SIPA1L1O43166 1804 aa25.73■■□□□ 1.71
VSX1-205ENST00000429762 CLRN2A0PK11 232 aa25.72■■□□□ 1.71
VSX1-205ENST00000429762 DDTLA6NHG4 134 aaPredicted RBP25.72■■□□□ 1.71
VSX1-205ENST00000429762 FAM196BA6NMK8 535 aa25.72■■□□□ 1.71
VSX1-205ENST00000429762 PDIA4P13667 645 aaKnown RBP25.72■■□□□ 1.71
VSX1-205ENST00000429762 PTMSP20962 102 aa25.72■■□□□ 1.71
VSX1-205ENST00000429762 SSRP1Q08945 709 aaKnown RBP25.72■■□□□ 1.71
VSX1-205ENST00000429762 SH3BP5LQ7L8J4 393 aa25.72■■□□□ 1.71
VSX1-205ENST00000429762 DDX49Q9Y6V7 483 aaKnown RBP25.72■■□□□ 1.71
VSX1-205ENST00000429762 FMNL1O95466 1100 aaPredicted RBP25.71■■□□□ 1.71
VSX1-205ENST00000429762 IFNAR1P17181 557 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 NBPF11Q86T75 865 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 IDI2Q9BXS1 227 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 KAT14Q9H8E8 782 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 SERPINB13Q9UIV8 391 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 GADD45BO75293 160 aaPredicted RBP25.71■■□□□ 1.71
VSX1-205ENST00000429762 DDAH1O94760 285 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 RCAN1P53805 252 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 CIAPIN1Q6FI81 312 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 ZSCAN29Q8IWY8 852 aaPredicted RBP25.71■■□□□ 1.71
VSX1-205ENST00000429762 STX8Q9UNK0 236 aa25.71■■□□□ 1.71
VSX1-205ENST00000429762 ARFGEF1Q9Y6D6 1849 aa25.7■■□□□ 1.71
VSX1-205ENST00000429762 HLA-DOAP06340 250 aa25.7■■□□□ 1.7
VSX1-205ENST00000429762 AKR1B1P15121 316 aa25.7■■□□□ 1.7
VSX1-205ENST00000429762 NEDD1Q8NHV4 660 aa25.7■■□□□ 1.7
VSX1-205ENST00000429762 GPT2Q8TD30 523 aa25.7■■□□□ 1.7
VSX1-205ENST00000429762 TFIP11Q9UBB9 837 aaKnown RBP25.7■■□□□ 1.7
VSX1-205ENST00000429762 HDAC9Q9UKV0 1011 aa25.7■■□□□ 1.7
VSX1-205ENST00000429762 SPDYE2BA6NHP3 402 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 SPDYE6P0CI01 402 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 DLGAP5Q15398 846 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 DGKHQ86XP1 1220 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 CLEC10AQ8IUN9 316 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 CRACR2BQ8N4Y2 399 aaPredicted RBP25.69■■□□□ 1.7
VSX1-205ENST00000429762 TCP11L1Q9NUJ3 509 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 CCDC196A0A1B0GTZ2 297 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 hCG_1642624A0A1W2PR95 340 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 SHMT1P34896 483 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 RASGRP2Q7LDG7 609 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 OGFOD1Q8N543 542 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 PNMA1Q8ND90 353 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms