RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 KLHL14Q9P2G3 628 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
ITSN1-209ENST00000399352 PPP2R2CQ9Y2T4 447 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 BAG2O95816 211 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 ETF1P62495 437 aaKnown RBP17.89■□□□□ 0.45
ITSN1-209ENST00000399352 GAS2L3Q86XJ1 694 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 LIN9Q5TKA1 542 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 G2E3Q7L622 706 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 RPGRIP1Q96KN7 1286 aa17.89■□□□□ 0.45
ITSN1-209ENST00000399352 ANGEL1Q9UNK9 670 aaKnown RBP17.89■□□□□ 0.45
ITSN1-209ENST00000399352 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 COG7P83436 770 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 SFMBT2Q5VUG0 894 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 PHLDB3Q6NSJ2 640 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
ITSN1-209ENST00000399352 ARHGAP42A6NI28 874 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 PTPROQ16827 1216 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 LONRF2Q1L5Z9 754 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 PYCARDQ9ULZ3 195 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 PCF11O94913 1555 aaKnown RBP17.88■□□□□ 0.45
ITSN1-209ENST00000399352 BACH1O14867 736 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 FLOT1O75955 427 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 RPSAP08865 295 aaKnown RBP17.88■□□□□ 0.45
ITSN1-209ENST00000399352 KRT40Q6A162 431 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 NELFCDQ8IXH7 590 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 PPP2R5CQ13362 524 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 TMEM87BQ96K49 555 aa17.88■□□□□ 0.45
ITSN1-209ENST00000399352 LRRC8AQ8IWT6 810 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 MYO1AQ9UBC5 1043 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 NR1I2O75469 434 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 RAD51AP2Q09MP3 1159 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 UHMK1Q8TAS1 419 aaKnown RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 RAB3IPQ96QF0 476 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 CALUO43852 315 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 SEC31AO94979 1220 aaKnown RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 SLC8A1P32418 973 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 CA8P35219 290 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 HERC4Q5GLZ8 1057 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 SYCE1Q8N0S2 351 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 RFC4P35249 363 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 SH2D4BQ5SQS7 431 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 SERTAD1Q9UHV2 236 aa17.87■□□□□ 0.45
ITSN1-209ENST00000399352 RRP15Q9Y3B9 282 aaKnown RBP17.87■□□□□ 0.45
ITSN1-209ENST00000399352 CCDC169A6NNP5 214 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 TROVE2P10155 538 aaKnown RBP eCLIP17.86■□□□□ 0.45
ITSN1-209ENST00000399352 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 UIMC1Q96RL1 719 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 RAB17Q9H0T7 212 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
ITSN1-209ENST00000399352 SNCBQ16143 134 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 RASIP1Q5U651 963 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 NLRP3Q96P20 1036 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 DBNDD2Q9BQY9 259 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 GPCPD1Q9NPB8 672 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 PRDM1O75626 825 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 FAM71BQ8TC56 605 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
ITSN1-209ENST00000399352 MAN1A1P33908 653 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 SATB1Q01826 763 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 PKP1Q13835 747 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 CASC4Q6P4E1 433 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 KCNK3O14649 394 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 DPH5Q9H2P9 285 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 KIAA1468Q9P260 1216 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 USH1CQ9Y6N9 552 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 HOMER3Q9NSC5 361 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 NDUFB9Q9Y6M9 179 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 LGSNQ5TDP6 509 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 MAEAQ7L5Y9 396 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 LRRC43Q8N309 656 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 TRIM58Q8NG06 486 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 GPT2Q8TD30 523 aa17.85■□□□□ 0.45
ITSN1-209ENST00000399352 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 E2F5Q15329 346 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 FCHSD1Q86WN1 690 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 OR8K1Q8NGG5 319 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 MED4Q9NPJ6 270 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 BUB1O43683 1085 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 MRPL12P52815 198 aaKnown RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 SPATS2Q86XZ4 545 aaKnown RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 LRWD1Q9UFC0 647 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 DCUN1D2Q6PH85 259 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 ZNF804AQ7Z570 1209 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 CTAGE3PQ8IX95 158 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 PROCA1Q8NCQ7 364 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 TRIM4Q9C037 500 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 hCG_1642624A0A1W2PR95 340 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 HAUS7Q99871 368 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
ITSN1-209ENST00000399352 HYOU1Q9Y4L1 999 aa17.84■□□□□ 0.45
ITSN1-209ENST00000399352 KRIT1O00522 736 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms