RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 RTN1Q16799 776 aa22.34■■□□□ 1.17
UBL4A-202ENST00000369660 HHIPL2Q6UWX4 724 aa22.34■■□□□ 1.17
UBL4A-202ENST00000369660 IGSF3O75054 1194 aa22.34■■□□□ 1.17
UBL4A-202ENST00000369660 NTRK3Q16288 839 aa22.34■■□□□ 1.17
UBL4A-202ENST00000369660 ZNF444Q8N0Y2 327 aaPredicted RBP22.34■■□□□ 1.17
UBL4A-202ENST00000369660 GPT2Q8TD30 523 aa22.34■■□□□ 1.17
UBL4A-202ENST00000369660 CEBPZQ03701 1054 aaKnown RBP22.33■■□□□ 1.17
UBL4A-202ENST00000369660 FANCBQ8NB91 859 aa22.33■■□□□ 1.17
UBL4A-202ENST00000369660 TDRD3Q9H7E2 651 aaKnown RBP22.33■■□□□ 1.17
UBL4A-202ENST00000369660 RASA1P20936 1047 aa22.33■■□□□ 1.16
UBL4A-202ENST00000369660 GUCY1A2P33402 732 aa22.33■■□□□ 1.16
UBL4A-202ENST00000369660 ZDHHC15Q96MV8 337 aa22.33■■□□□ 1.16
UBL4A-202ENST00000369660 FAM196BA6NMK8 535 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
UBL4A-202ENST00000369660 IARSP41252 1262 aaKnown RBP22.32■■□□□ 1.16
UBL4A-202ENST00000369660 GSE1Q14687 1217 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 CERS3Q8IU89 383 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 C8orf76Q96K31 380 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 RBM27Q9P2N5 1060 aaKnown RBP22.32■■□□□ 1.16
UBL4A-202ENST00000369660 STX8Q9UNK0 236 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 CATIPQ7Z7H3 387 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 TMTC2Q8N394 836 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 FTOQ9C0B1 505 aaKnown RBP eCLIP22.32■■□□□ 1.166e-9■■□□□ 12.8
UBL4A-202ENST00000369660 ATP6V1DQ9Y5K8 247 aa22.32■■□□□ 1.16
UBL4A-202ENST00000369660 ZNF646O15015 1829 aaPredicted RBP22.31■■□□□ 1.16
UBL4A-202ENST00000369660 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 RCSD1Q6JBY9 416 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 RASGRP2Q7LDG7 609 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 PRMT6Q96LA8 375 aaPredicted RBP22.31■■□□□ 1.16
UBL4A-202ENST00000369660 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
UBL4A-202ENST00000369660 PLEKHA8P1O95397 391 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 RASSF7Q02833 373 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 RESTQ13127 1097 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 CAVIN1Q6NZI2 390 aaKnown RBP22.31■■□□□ 1.16
UBL4A-202ENST00000369660 C16orf86Q6ZW13 317 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 ALG1Q9BT22 464 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 TAOK3Q9H2K8 898 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 KIF3AQ9Y496 699 aa22.31■■□□□ 1.16
UBL4A-202ENST00000369660 CPLX2Q6PUV4 134 aaKnown RBP22.3■■□□□ 1.16
UBL4A-202ENST00000369660 CLEC10AQ8IUN9 316 aa22.3■■□□□ 1.16
UBL4A-202ENST00000369660 ZSCAN29Q8IWY8 852 aaPredicted RBP22.3■■□□□ 1.16
UBL4A-202ENST00000369660 NIM1KQ8IY84 436 aa22.3■■□□□ 1.16
UBL4A-202ENST00000369660 OSBPL5Q9H0X9 879 aaPredicted RBP22.3■■□□□ 1.16
UBL4A-202ENST00000369660 ROBO3Q96MS0 1386 aa22.3■■□□□ 1.16
UBL4A-202ENST00000369660 NFKBIEO00221 500 aa22.3■■□□□ 1.16
UBL4A-202ENST00000369660 SCAF8Q9UPN6 1271 aaKnown RBP22.3■■□□□ 1.16
UBL4A-202ENST00000369660 EIF6P56537 245 aaKnown RBP22.29■■□□□ 1.16
UBL4A-202ENST00000369660 TROAPQ12815 778 aa22.29■■□□□ 1.16
UBL4A-202ENST00000369660 RSBN1LQ6PCB5 846 aaPredicted RBP22.29■■□□□ 1.16
UBL4A-202ENST00000369660 SHTN1A0MZ66 631 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 CLRN2A0PK11 232 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 CDKL5O76039 1030 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
UBL4A-202ENST00000369660 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
UBL4A-202ENST00000369660 MTA3Q9BTC8 594 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 FAM198AQ9UFP1 575 aa22.28■■□□□ 1.16
UBL4A-202ENST00000369660 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
UBL4A-202ENST00000369660 KAT14Q9H8E8 782 aa22.27■■□□□ 1.16
UBL4A-202ENST00000369660 SERPINA10Q9UK55 444 aa22.27■■□□□ 1.16
UBL4A-202ENST00000369660 ZNRF3Q9ULT6 936 aa22.27■■□□□ 1.16
UBL4A-202ENST00000369660 FKBP1AP62942 108 aaKnown RBP22.27■■□□□ 1.16
UBL4A-202ENST00000369660 CXCL9Q07325 125 aa22.27■■□□□ 1.16
UBL4A-202ENST00000369660 FBXO18Q8NFZ0 1043 aa22.27■■□□□ 1.16
UBL4A-202ENST00000369660 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
UBL4A-202ENST00000369660 KLHL40Q2TBA0 621 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 TTC6Q86TZ1 520 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 SERPINB13Q9UIV8 391 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 BRCA1P38398 1863 aaKnown RBP22.26■■□□□ 1.15
UBL4A-202ENST00000369660 KIF28PB7ZC32 967 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 VIL1P09327 827 aaKnown RBP22.26■■□□□ 1.15
UBL4A-202ENST00000369660 IFNAR1P17181 557 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 KRT85P78386 507 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 SKOR2Q2VWA4 1001 aaPredicted RBP22.26■■□□□ 1.15
UBL4A-202ENST00000369660 SOGA3Q5TF21 947 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 CRACR2BQ8N4Y2 399 aaPredicted RBP22.26■■□□□ 1.15
UBL4A-202ENST00000369660 PNMA1Q8ND90 353 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
UBL4A-202ENST00000369660 TCP10L2B9ZVM9 353 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 AKR1B1P15121 316 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 CEP95Q96GE4 821 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 KCNJ14Q9UNX9 436 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 ECM29Q5VYK3 1845 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 FMNL1O95466 1100 aaPredicted RBP22.25■■□□□ 1.15
UBL4A-202ENST00000369660 PTMSP20962 102 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 SH3BP5LQ7L8J4 393 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 ZNF287Q9HBT7 754 aa22.25■■□□□ 1.15
UBL4A-202ENST00000369660 PRELPP51888 382 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 KRT40Q6A162 431 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 STAG2Q8N3U4 1231 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 V9GY48 417 aaPredicted RBP22.24■■□□□ 1.15
UBL4A-202ENST00000369660 CCDC196A0A1B0GTZ2 297 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 MPHOSPH10O00566 681 aaKnown RBP22.24■■□□□ 1.15
UBL4A-202ENST00000369660 GOLGA8HP0CJ92 632 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 TRIM22Q8IYM9 498 aa22.24■■□□□ 1.15
UBL4A-202ENST00000369660 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms