RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 KLRF2D3W0D1 207 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 PFKFB2O60825 505 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
CTR9-201ENST00000361367 CELF1Q92879 486 aaKnown RBP15.68■□□□□ 0.1
CTR9-201ENST00000361367 GPR101Q96P66 508 aaPredicted RBP15.68■□□□□ 0.1
CTR9-201ENST00000361367 LCORLQ8N3X6 602 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 CCDC17Q96LX7 622 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 COA1Q9GZY4 146 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 MINPP1Q9UNW1 487 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 PRKAB2O43741 272 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 HAUS3Q68CZ6 603 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
CTR9-201ENST00000361367 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
CTR9-201ENST00000361367 PIH1D3Q9NQM4 214 aaKnown RBP15.67■□□□□ 0.1
CTR9-201ENST00000361367 SMCO2A6NFE2 343 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 C21orf2O43822 256 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 AKR1B10O60218 316 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 RTKN2Q8IZC4 609 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 KIF18AQ8NI77 898 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 CUTAO60888 179 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 GOLGA8HP0CJ92 632 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 SKIDA1Q1XH10 827 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
CTR9-201ENST00000361367 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 MCAMP43121 646 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 NFIXQ14938 502 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 PUF60Q9UHX1 559 aaKnown RBP15.66■□□□□ 0.1
CTR9-201ENST00000361367 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 PHACTR2O75167 634 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 DNA2P51530 1060 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 EN1Q05925 392 aaPredicted RBP15.66■□□□□ 0.1
CTR9-201ENST00000361367 CCDC65Q8IXS2 484 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
CTR9-201ENST00000361367 LRWD1Q9UFC0 647 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 FRMPD2Q68DX3 1309 aaPredicted RBP15.66■□□□□ 0.1
CTR9-201ENST00000361367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.66■□□□□ 0.16e-7■■■■□ 24.5
CTR9-201ENST00000361367 ZMYM6O95789 1325 aa15.66■□□□□ 0.1
CTR9-201ENST00000361367 URI1O94763 535 aaPredicted RBP15.65■□□□□ 0.1
CTR9-201ENST00000361367 TNNT3P45378 269 aaPredicted RBP15.65■□□□□ 0.1
CTR9-201ENST00000361367 SPECC1Q5M775 1068 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 UBXN4Q92575 508 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 SERPINB13Q9UIV8 391 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 ERLIN1O75477 346 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 POLR2DO15514 142 aaKnown RBP15.65■□□□□ 0.1
CTR9-201ENST00000361367 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 PDIA3P30101 505 aaKnown RBP15.65■□□□□ 0.1
CTR9-201ENST00000361367 MECOMQ03112 1051 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 PIM2Q9P1W9 311 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 USP17L3A6NCW0 530 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 USP17L4A6NCW7 530 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 DDAH1O94760 285 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 MYSM1Q5VVJ2 828 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 USP17L1Q7RTZ2 530 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
CTR9-201ENST00000361367 KDM4FA0A1W2PPD8 638 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
CTR9-201ENST00000361367 BRD1O95696 1058 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 CCDC172P0C7W6 258 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 SNX29Q8TEQ0 813 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 NCBP1Q09161 790 aaKnown RBP15.64■□□□□ 0.09
CTR9-201ENST00000361367 NCAPH2Q6IBW4 605 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
CTR9-201ENST00000361367 BIN2Q9UBW5 565 aaPredicted RBP15.64■□□□□ 0.09
CTR9-201ENST00000361367 SWAP70Q9UH65 585 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 DCCP43146 1447 aa15.64■□□□□ 0.09
CTR9-201ENST00000361367 CALCRLQ16602 461 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 SCG2P13521 617 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 C16orf45Q96MC5 204 aaPredicted RBP15.63■□□□□ 0.09
CTR9-201ENST00000361367 CD163L1Q9NR16 1453 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 NEBLO76041 1014 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 NOP2P46087 812 aaKnown RBP15.63■□□□□ 0.09
CTR9-201ENST00000361367 CIAPIN1Q6FI81 312 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 FERMT2Q96AC1 680 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
CTR9-201ENST00000361367 APOA5Q6Q788 366 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 BLIDQ8IZY5 108 aa15.63■□□□□ 0.09
CTR9-201ENST00000361367 IMPG2Q9BZV3 1241 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 TAOK3Q9H2K8 898 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
CTR9-201ENST00000361367 CASQ1P31415 396 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 PDE4DQ08499 809 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 CCDC186Q7Z3E2 898 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 NOSTRINQ8IVI9 506 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 TBC1D5Q92609 795 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 PSTPIP2Q9H939 334 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 TMEM232C9JQI7 657 aa15.62■□□□□ 0.09
CTR9-201ENST00000361367 NOP56O00567 594 aaKnown RBP15.62■□□□□ 0.09
CTR9-201ENST00000361367 USP17L8P0C7I0 530 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms