RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 STX2P32856 288 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 TUBB2AQ13885 445 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 RPS6KA1Q15418 735 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 TUBB2BQ9BVA1 445 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 COG7P83436 770 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 CFAP221Q4G0U5 840 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 MYCT1Q8N699 235 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
COL18A1-203ENST00000359759 ZNF202O95125 648 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 KLHL30Q0D2K2 578 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 CCDC13Q8IYE1 715 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.78■□□□□ 0.44
COL18A1-203ENST00000359759 DEXIO95424 95 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 CTDSPL2Q05D32 466 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 PNOCQ13519 176 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
COL18A1-203ENST00000359759 NUP58Q9BVL2 599 aa17.78■□□□□ 0.44
COL18A1-203ENST00000359759 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 ARHGEF35A5YM69 484 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 USH1GQ495M9 461 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 CXorf38Q8TB03 319 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 PHKBQ93100 1093 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 SFMBT2Q5VUG0 894 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 ZC3H12CQ9C0D7 883 aaKnown RBP17.77■□□□□ 0.44
COL18A1-203ENST00000359759 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.44
COL18A1-203ENST00000359759 PPME1Q9Y570 386 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 PEX19P40855 299 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 TTC38Q5R3I4 469 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 CTAGE3PQ8IX95 158 aa17.77■□□□□ 0.44
COL18A1-203ENST00000359759 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.43
COL18A1-203ENST00000359759 CTNNA1P35221 906 aaKnown RBP17.77■□□□□ 0.43
COL18A1-203ENST00000359759 RDH13Q8NBN7 331 aa17.77■□□□□ 0.43
COL18A1-203ENST00000359759 RAB3IPQ96QF0 476 aaPredicted RBP17.77■□□□□ 0.43
COL18A1-203ENST00000359759 EFCC1Q9HA90 598 aa17.77■□□□□ 0.43
COL18A1-203ENST00000359759 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.43
COL18A1-203ENST00000359759 RRAGAQ7L523 313 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 TAB3Q8N5C8 712 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 FAM207AQ9NSI2 230 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 RGS16O15492 202 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 PLCG2P16885 1265 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 UHMK1Q8TAS1 419 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 MRPL44Q9H9J2 332 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 MTMR3Q13615 1198 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 POSTNQ15063 836 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 ADAT2Q7Z6V5 191 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 NACA2Q9H009 215 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 ZSCAN26Q16670 478 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 PALM2Q8IXS6 379 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 DCTPP1Q9H773 170 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 NLRC4Q9NPP4 1024 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 SPECC1L-ADORA2AF8WAN1 911 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 GABPB1Q06547 395 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 MTHFSDQ2M296 383 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 MORC4Q8TE76 937 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 KRT12Q99456 494 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 ANKFY1Q9P2R3 1169 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 LGSNQ5TDP6 509 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 NAP1L4Q99733 375 aaKnown RBP17.76■□□□□ 0.43
COL18A1-203ENST00000359759 SNX14Q9Y5W7 946 aa17.76■□□□□ 0.43
COL18A1-203ENST00000359759 MX2P20592 715 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 PPFIA1Q13136 1202 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 LSM14BQ9BX40 385 aaKnown RBP17.75■□□□□ 0.43
COL18A1-203ENST00000359759 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 BUB1O43683 1085 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 SETSIPP0DME0 302 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 RPS6KA2Q15349 733 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 NYXQ9GZU5 481 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 KCNJ14Q9UNX9 436 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 WHAMMP3Q1A5X7 153 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 ATL3Q6DD88 541 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 CDC37L1Q7L3B6 337 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 TMTC1Q8IUR5 882 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 TEX11Q8IYF3 940 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-203ENST00000359759 IMPACTQ9P2X3 320 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 TOM1O60784 492 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 PPP1R2P41236 205 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 SLC12A2P55011 1212 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 SYCE1Q8N0S2 351 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 HERC4Q5GLZ8 1057 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-203ENST00000359759 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 MRPL46Q9H2W6 279 aaKnown RBP17.75■□□□□ 0.43
COL18A1-203ENST00000359759 EXOC7Q9UPT5 735 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 NFE2L3Q9Y4A8 694 aa17.75■□□□□ 0.43
COL18A1-203ENST00000359759 CUTAO60888 179 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 TROVE2P10155 538 aaKnown RBP eCLIP17.74■□□□□ 0.433e-6■■□□□ 12.9
COL18A1-203ENST00000359759 CD19P15391 556 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 ABCB4P21439 1286 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 PRDM1O75626 825 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 IL1RL1Q01638 556 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 U2AF1L4Q8WU68 220 aaKnown RBP17.74■□□□□ 0.43
COL18A1-203ENST00000359759 RSAD2Q8WXG1 361 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms