RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.5
MSL1-201ENST00000339569 MS4A3Q96HJ5 214 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 CCSER2Q9H7U1 834 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 GINM1Q9NU53 330 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 WDR90Q96KV7 1748 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 ADAMTSL1Q8N6G6 1762 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 MYH1P12882 1939 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 MYH8P13535 1937 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 EIF2S2P20042 333 aaKnown RBP5.71□□□□□ -1.5
MSL1-201ENST00000339569 SCP2P22307 547 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 YY1P25490 414 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 CCDC57Q2TAC2 916 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 TPTE2Q6XPS3 522 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 METTL3Q86U44 580 aaKnown RBP5.71□□□□□ -1.5
MSL1-201ENST00000339569 FAM174AQ8TBP5 190 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 PURBQ96QR8 312 aaKnown RBP5.71□□□□□ -1.5
MSL1-201ENST00000339569 AS3MTQ9HBK9 375 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 TCP11L1Q9NUJ3 509 aa5.71□□□□□ -1.5
MSL1-201ENST00000339569 DBNLQ9UJU6 430 aaKnown RBP5.71□□□□□ -1.5
MSL1-201ENST00000339569 POLRMTO00411 1230 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 ATP9BO43861 1147 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 TGFB3P10600 412 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 PSMA5P28066 241 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 HOXA7P31268 230 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 HLFQ16534 295 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 HLA-CQ95604 372 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 MYH2Q9UKX2 1941 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 FGAP02671 866 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 GYS1P13807 737 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 CD53P19397 219 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 TKFCQ3LXA3 575 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 PPP4R3BQ5MIZ7 849 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 TRAPPC3LQ5T215 181 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 LMBR1LQ6UX01 489 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 ELOA2Q8IYF1 753 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 SENP7Q9BQF6 1050 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 GPHNQ9NQX3 736 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 DENND2AQ9ULE3 1009 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 NDUFB9Q9Y6M9 179 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 PARP14Q460N5 1801 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 K7ELQ4 463 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 RNF113AO15541 343 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 PRPF3O43395 683 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 DNAJC6O75061 913 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 PHF14O94880 888 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 FXR2P51116 673 aaKnown RBP eCLIP5.7□□□□□ -1.5
MSL1-201ENST00000339569 TOMM20Q15388 145 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 FAM98CQ17RN3 349 aaKnown RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 EAPPQ56P03 285 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 NYAP1Q6ZVC0 841 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 APPBP2Q92624 585 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 ANP32EQ9BTT0 268 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 CEP126Q9P2H0 1117 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 CCNL1Q9UK58 526 aaPredicted RBP5.7□□□□□ -1.5
MSL1-201ENST00000339569 GAKO14976 1311 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 STK36Q9NRP7 1315 aa5.7□□□□□ -1.5
MSL1-201ENST00000339569 ELL2O00472 640 aaPredicted RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 LMNB1P20700 586 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 ADD2P35612 726 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 EXOSC10Q01780 885 aaKnown RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 RNF20Q5VTR2 975 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 DPY19L2Q6NUT2 758 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 FERMT3Q86UX7 667 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 L3MBTL3Q96JM7 780 aaPredicted RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 MKNK1Q9BUB5 465 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 TGIF2Q9GZN2 237 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.69□□□□□ -1.5
MSL1-201ENST00000339569 C12orf49Q9H741 205 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 PARP2Q9UGN5 583 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 SLC26A4O43511 780 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 TAF5LO75529 589 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 NPR1P16066 1061 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 KCNQ4P56696 695 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 CCDC158Q5M9N0 1113 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 ICE2Q659A1 982 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 UBE3BQ7Z3V4 1068 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 SUGP1Q8IWZ8 645 aaKnown RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 TDRD7Q8NHU6 1098 aaKnown RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 RBM17Q96I25 401 aaKnown RBP5.69□□□□□ -1.5
MSL1-201ENST00000339569 EPAS1Q99814 870 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 SBF1O95248 1867 aa5.69□□□□□ -1.5
MSL1-201ENST00000339569 XDHP47989 1333 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 USP17L3A6NCW0 530 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 USP17L4A6NCW7 530 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 HCLS1P14317 486 aaPredicted RBP5.68□□□□□ -1.5
MSL1-201ENST00000339569 ITGA6P23229 1130 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 USP17L2Q6R6M4 530 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 USP17L1Q7RTZ2 530 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 TBC1D22AQ8WUA7 517 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 ZNF274Q96GC6 653 aaPredicted RBP5.68□□□□□ -1.5
MSL1-201ENST00000339569 PRIMPOLQ96LW4 560 aa5.68□□□□□ -1.5
MSL1-201ENST00000339569 AVENQ9NQS1 362 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms