RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 DDX19AQ9NUU7 478 aaKnown RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 PPFIA4O75335 1185 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 MRPL12P52815 198 aaKnown RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 GSDMDP57764 484 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 MRFAP1Q9Y605 127 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 SNAP23O00161 211 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
SF3B2-201ENST00000322535 TIMM10P62072 90 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
SF3B2-201ENST00000322535 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
SF3B2-201ENST00000322535 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 H7C1W4 665 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 GNPATO15228 680 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
SF3B2-201ENST00000322535 MYH14Q7Z406 1995 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 MYO1FO00160 1098 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 AKNAD1Q5T1N1 836 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 CLASRPQ8N2M8 674 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 RHOXF2Q9BQY4 288 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 XPO4Q9C0E2 1151 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 NIP7Q9Y221 180 aaKnown RBP eCLIP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 ARFGEF2Q9Y6D5 1785 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 ZSCAN9O15535 394 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 CDKL5O76039 1030 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 MAGEA10P43363 369 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 RANBP1P43487 201 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 FOSBP53539 338 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 THEMIS2Q5TEJ8 643 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 HDXQ7Z353 690 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 PLEKHG4BQ96PX9 1271 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 WDR24Q96S15 920 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 MMTAG2Q9BU76 263 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 RANBP17Q9H2T7 1088 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
SF3B2-201ENST00000322535 AFDNP55196 1824 aaKnown RBP11.68□□□□□ -0.54
SF3B2-201ENST00000322535 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-201ENST00000322535 KCNB1Q14721 858 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-201ENST00000322535 GOLGA1Q92805 767 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 CABS1Q96KC9 395 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 ISCA1Q9BUE6 129 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 UTYO14607 1347 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-201ENST00000322535 SETSIPP0DME0 302 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 INPP5BP32019 993 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-201ENST00000322535 DDR1Q08345 913 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 MYBPC2Q14324 1141 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 NAA25Q14CX7 972 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 SARM1Q6SZW1 724 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 CEP57Q86XR8 500 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 GREM2Q9H772 168 aa11.67□□□□□ -0.54
SF3B2-201ENST00000322535 PHLPP2Q6ZVD8 1323 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 NEFHP12036 1026 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 ZBED6P86452 979 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 TRIM65Q6PJ69 517 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 SPDL1Q96EA4 605 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 CHUKO15111 745 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 IMPDH2P12268 514 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 CCDC15Q0P6D6 951 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 MTX1Q13505 466 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 STX1AQ16623 288 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 LEO1Q8WVC0 666 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 EZH1Q92800 747 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 DHX58Q96C10 678 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 TXLNAP40222 546 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 DHX40Q8IX18 779 aaKnown RBP11.66□□□□□ -0.54
SF3B2-201ENST00000322535 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 GDAP1L1Q96MZ0 367 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 PAPPAQ13219 1627 aa11.66□□□□□ -0.54
SF3B2-201ENST00000322535 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.65□□□□□ -0.54
SF3B2-201ENST00000322535 TTC41PQ6P2S7 1318 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms