RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RASA1P20936 1047 aa26.66■■□□□ 1.86
PTX3-201ENST00000295927 RSBN1LQ6PCB5 846 aaPredicted RBP26.66■■□□□ 1.86
PTX3-201ENST00000295927 CNPY2Q9Y2B0 182 aa26.66■■□□□ 1.86
PTX3-201ENST00000295927 DNM1Q05193 864 aaKnown RBP26.65■■□□□ 1.86
PTX3-201ENST00000295927 CATIPQ7Z7H3 387 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 NIM1KQ8IY84 436 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 FANCBQ8NB91 859 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 PHKBQ93100 1093 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 MYO3BQ8WXR4 1341 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 PSMD14O00487 310 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 VIL1P09327 827 aaKnown RBP26.65■■□□□ 1.86
PTX3-201ENST00000295927 TTC6Q86TZ1 520 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 OSBPL5Q9H0X9 879 aaPredicted RBP26.65■■□□□ 1.86
PTX3-201ENST00000295927 GDPD2Q9HCC8 539 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 ZNRF3Q9ULT6 936 aa26.65■■□□□ 1.86
PTX3-201ENST00000295927 TSPY3P0CV98 308 aa26.64■■□□□ 1.86
PTX3-201ENST00000295927 TSPY8P0CW00 308 aa26.64■■□□□ 1.86
PTX3-201ENST00000295927 RESTQ13127 1097 aa26.64■■□□□ 1.86
PTX3-201ENST00000295927 TAOK3Q9H2K8 898 aa26.64■■□□□ 1.86
PTX3-201ENST00000295927 IL17RBQ9NRM6 502 aa26.64■■□□□ 1.86
PTX3-201ENST00000295927 CCDC196A0A1B0GTZ2 297 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 IFNAR1P17181 557 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 GUCY1B3Q02153 619 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 NFIAQ12857 509 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 RCSD1Q6JBY9 416 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 BCS1LQ9Y276 419 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 DDX49Q9Y6V7 483 aaKnown RBP26.63■■□□□ 1.85
PTX3-201ENST00000295927 PPP2R5BQ15173 497 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 FAM173BQ6P4H8 233 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 C8orf76Q96K31 380 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 TCP11L1Q9NUJ3 509 aa26.63■■□□□ 1.85
PTX3-201ENST00000295927 MYH8P13535 1937 aa26.62■■□□□ 1.85
PTX3-201ENST00000295927 NCLP19338 710 aaKnown RBP26.62■■□□□ 1.85
PTX3-201ENST00000295927 TROAPQ12815 778 aa26.62■■□□□ 1.85
PTX3-201ENST00000295927 CFAP100Q494V2 611 aa26.62■■□□□ 1.85
PTX3-201ENST00000295927 USP48Q86UV5 1035 aa26.62■■□□□ 1.85
PTX3-201ENST00000295927 GMLQ99445 158 aa26.62■■□□□ 1.85
PTX3-201ENST00000295927 ZSCAN16Q9H4T2 348 aaPredicted RBP26.62■■□□□ 1.85
PTX3-201ENST00000295927 NFKBIEO00221 500 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 DDAH1O94760 285 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 CALM1P0DP23 149 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 CALM2P0DP24 149 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 CALM3P0DP25 149 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 GABPAQ06546 454 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 SSRP1Q08945 709 aaKnown RBP26.61■■□□□ 1.85
PTX3-201ENST00000295927 DGKHQ86XP1 1220 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 TMEM87AQ8NBN3 555 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 MYH15Q9Y2K3 1946 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 STK36Q9NRP7 1315 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 FMNL1O95466 1100 aaPredicted RBP26.61■■□□□ 1.85
PTX3-201ENST00000295927 CACNB3P54284 484 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 KLHL40Q2TBA0 621 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 CCDC178Q5BJE1 867 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 ANKS1AQ92625 1134 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 IDI2Q9BXS1 227 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 SLC26A6Q9BXS9 759 aa26.61■■□□□ 1.85
PTX3-201ENST00000295927 OTUD7BQ6GQQ9 843 aa26.6■■□□□ 1.85
PTX3-201ENST00000295927 FBXO18Q8NFZ0 1043 aa26.6■■□□□ 1.85
PTX3-201ENST00000295927 ALG1Q9BT22 464 aa26.6■■□□□ 1.85
PTX3-201ENST00000295927 NBPF11Q86T75 865 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 ZFPM1Q8IX07 1006 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 AIFM3Q96NN9 605 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 GZF1Q9H116 711 aaPredicted RBP26.59■■□□□ 1.85
PTX3-201ENST00000295927 FIBPO43427 364 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 GSE1Q14687 1217 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 CMTR1Q8N1G2 835 aaKnown RBP26.59■■□□□ 1.85
PTX3-201ENST00000295927 CRACR2BQ8N4Y2 399 aaPredicted RBP26.59■■□□□ 1.85
PTX3-201ENST00000295927 NEDD1Q8NHV4 660 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 PRMT6Q96LA8 375 aaPredicted RBP26.59■■□□□ 1.85
PTX3-201ENST00000295927 GJB4Q9NTQ9 266 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 FAM198AQ9UFP1 575 aa26.59■■□□□ 1.85
PTX3-201ENST00000295927 ZBTB12Q9Y330 459 aaPredicted RBP26.59■■□□□ 1.85
PTX3-201ENST00000295927 MYH6P13533 1939 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 KRT85P78386 507 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 NLGN2Q8NFZ4 835 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 GPT2Q8TD30 523 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 TDRD3Q9H7E2 651 aaKnown RBP26.58■■□□□ 1.85
PTX3-201ENST00000295927 KAT14Q9H8E8 782 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 RBM28Q9NW13 759 aaKnown RBP26.58■■□□□ 1.85
PTX3-201ENST00000295927 SERPINB13Q9UIV8 391 aa26.58■■□□□ 1.85
PTX3-201ENST00000295927 ARFGEF1Q9Y6D6 1849 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 HLA-DOAP06340 250 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 CXCL9Q07325 125 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 TCP10Q12799 353 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 TRIM22Q8IYM9 498 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 CCDC82Q8N4S0 544 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 RGS22Q8NE09 1264 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 NPM3O75607 178 aaKnown RBP26.57■■□□□ 1.84
PTX3-201ENST00000295927 JDP2Q8WYK2 163 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 HDAC9Q9UKV0 1011 aa26.57■■□□□ 1.84
PTX3-201ENST00000295927 SIPA1L1O43166 1804 aa26.56■■□□□ 1.84
PTX3-201ENST00000295927 UBE2Q2LH0YL09 131 aa26.56■■□□□ 1.84
PTX3-201ENST00000295927 GADD45BO75293 160 aaPredicted RBP26.56■■□□□ 1.84
PTX3-201ENST00000295927 SWAP70Q9UH65 585 aa26.56■■□□□ 1.84
PTX3-201ENST00000295927 AGBL3Q8NEM8 1001 aa26.55■■□□□ 1.84
PTX3-201ENST00000295927 CSPP1Q1MSJ5 1256 aa26.55■■□□□ 1.84
PTX3-201ENST00000295927 OGFOD1Q8N543 542 aa26.55■■□□□ 1.84
PTX3-201ENST00000295927 PNMA1Q8ND90 353 aa26.55■■□□□ 1.84
PTX3-201ENST00000295927 CTCFLQ8NI51 663 aaPredicted RBP26.55■■□□□ 1.84
PTX3-201ENST00000295927 WASF1Q92558 559 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms