RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 SLC10A4Q96EP9 437 aa26.8■■□□□ 1.88
LINC01116-201ENST00000295549 USP26Q9BXU7 913 aa26.8■■□□□ 1.88
LINC01116-201ENST00000295549 TACC3Q9Y6A5 838 aa26.8■■□□□ 1.88
LINC01116-201ENST00000295549 SNCAIPQ9Y6H5 919 aa26.8■■□□□ 1.88
LINC01116-201ENST00000295549 RASSF10A6NK89 507 aa26.79■■□□□ 1.88
LINC01116-201ENST00000295549 PRDM1O75626 825 aa26.79■■□□□ 1.88
LINC01116-201ENST00000295549 ASNSP08243 561 aa26.79■■□□□ 1.88
LINC01116-201ENST00000295549 ABCB5Q2M3G0 1257 aa26.79■■□□□ 1.88
LINC01116-201ENST00000295549 ZNF444Q8N0Y2 327 aaPredicted RBP26.79■■□□□ 1.88
LINC01116-201ENST00000295549 PICK1Q9NRD5 415 aa26.79■■□□□ 1.88
LINC01116-201ENST00000295549 SLC27A2O14975 620 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 GDF11O95390 407 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 NT5C2P49902 561 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 JAG1P78504 1218 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 RNF20Q5VTR2 975 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 CREB3L3Q68CJ9 461 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 RGMBQ6NW40 437 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 INCENPQ9NQS7 918 aa26.78■■□□□ 1.88
LINC01116-201ENST00000295549 ELP3Q9H9T3 547 aa26.77■■□□□ 1.88
LINC01116-201ENST00000295549 CABP5Q9NP86 173 aa26.77■■□□□ 1.88
LINC01116-201ENST00000295549 ZBTB21Q9ULJ3 1066 aa26.77■■□□□ 1.88
LINC01116-201ENST00000295549 GH2P01242 217 aa26.76■■□□□ 1.87
LINC01116-201ENST00000295549 AKR1B1P15121 316 aa26.76■■□□□ 1.87
LINC01116-201ENST00000295549 PTPRAP18433 802 aa26.76■■□□□ 1.87
LINC01116-201ENST00000295549 ZNF157P51786 506 aaPredicted RBP26.76■■□□□ 1.87
LINC01116-201ENST00000295549 ERO1BQ86YB8 467 aa26.76■■□□□ 1.87
LINC01116-201ENST00000295549 SPDYE5A6NIY4 337 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 SEC24BO95487 1268 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 HSPA4P34932 840 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 SHROOM1Q2M3G4 852 aaPredicted RBP26.75■■□□□ 1.87
LINC01116-201ENST00000295549 DEFB115Q30KQ5 88 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 TMEM179Q6ZVK1 233 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 KCNB2Q92953 911 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 CNNM2Q9H8M5 875 aa26.75■■□□□ 1.87
LINC01116-201ENST00000295549 PPATQ06203 517 aa26.74■■□□□ 1.87
LINC01116-201ENST00000295549 TSGA10IPQ3SY00 556 aa26.74■■□□□ 1.87
LINC01116-201ENST00000295549 CCDC102AQ96A19 550 aa26.74■■□□□ 1.87
LINC01116-201ENST00000295549 TAF6LQ9Y6J9 622 aa26.74■■□□□ 1.87
LINC01116-201ENST00000295549 LAMA4Q16363 1823 aa26.74■■□□□ 1.87
LINC01116-201ENST00000295549 MPHOSPH10O00566 681 aaKnown RBP26.73■■□□□ 1.87
LINC01116-201ENST00000295549 OPTNQ96CV9 577 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 TBC1D2Q9BYX2 928 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 KRT23Q9C075 422 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 TOMM22Q9NS69 142 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 NEDD4P46934 1319 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 OTOFQ9HC10 1997 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 USP17L5A8MUK1 530 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 E7EWF7 191 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 RANBP6O60518 1105 aaKnown RBP26.73■■□□□ 1.87
LINC01116-201ENST00000295549 TSPY3P0CV98 308 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 TSPY8P0CW00 308 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 ZKSCAN1P17029 563 aaPredicted RBP26.73■■□□□ 1.87
LINC01116-201ENST00000295549 GUCY1A2P33402 732 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 HTRA3P83110 453 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 RASAL3Q86YV0 1011 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 NEDD1Q8NHV4 660 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 ESR2Q92731 530 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.73■■□□□ 1.87
LINC01116-201ENST00000295549 ZHX2Q9Y6X8 837 aa26.73■■□□□ 1.87
LINC01116-201ENST00000295549 ZBTB48P10074 688 aaPredicted RBP26.72■■□□□ 1.87
LINC01116-201ENST00000295549 TFAP4Q01664 338 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 TRDNQ13061 729 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 RAB3GAP1Q15042 981 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 FAM47AQ5JRC9 791 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 RRP12Q5JTH9 1297 aaKnown RBP26.72■■□□□ 1.87
LINC01116-201ENST00000295549 RASEFQ8IZ41 740 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 CNKSR2Q8WXI2 1034 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 WNK4Q96J92 1243 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.72■■□□□ 1.87
LINC01116-201ENST00000295549 PLIN4Q96Q06 1357 aa26.72■■□□□ 1.87
LINC01116-201ENST00000295549 TSPY2A6NKD2 308 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 FAM155AB1AL88 458 aaPredicted RBP26.71■■□□□ 1.87
LINC01116-201ENST00000295549 SLC10A3P09131 477 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 PPIL2Q13356 520 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 SEPT2Q15019 361 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 SPRYD7Q5W111 196 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 STOX1Q6ZVD7 989 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 KANSL2Q9H9L4 492 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.71■■□□□ 1.87
LINC01116-201ENST00000295549 AFG3L2Q9Y4W6 797 aa26.71■■□□□ 1.87
LINC01116-201ENST00000295549 IGKV6D-41A0A0C4DH26 115 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 MCCP23508 829 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 NCOA7Q8NI08 942 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 OTUD5Q96G74 571 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 WDR18Q9BV38 432 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 AS3MTQ9HBK9 375 aa26.7■■□□□ 1.86
LINC01116-201ENST00000295549 DOCK1Q14185 1865 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 B4E1Z4 1266 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 GJA5P36382 358 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 KRT32Q14532 448 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 CYP4F22Q6NT55 531 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 TCP11L1Q9NUJ3 509 aa26.69■■□□□ 1.86
LINC01116-201ENST00000295549 IRF6O14896 467 aa26.68■■□□□ 1.86
LINC01116-201ENST00000295549 KDM4AO75164 1064 aa26.68■■□□□ 1.86
LINC01116-201ENST00000295549 ECE1P42892 770 aa26.68■■□□□ 1.86
LINC01116-201ENST00000295549 PAXIP1Q6ZW49 1069 aaPredicted RBP26.68■■□□□ 1.86
LINC01116-201ENST00000295549 CCDC84Q86UT8 332 aaPredicted RBP26.68■■□□□ 1.86
LINC01116-201ENST00000295549 ZNF280CQ8ND82 737 aa26.68■■□□□ 1.86
LINC01116-201ENST00000295549 NKX2-3Q8TAU0 364 aa26.68■■□□□ 1.86
LINC01116-201ENST00000295549 CAPNS2Q96L46 248 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms