RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 IFNAR1P17181 557 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 ERCC4Q92889 916 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 CABP5Q9NP86 173 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 KIF23Q02241 960 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 ANO1Q5XXA6 986 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 HEATR3Q7Z4Q2 680 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 KCNG4Q8TDN1 519 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 KCNQ5Q9NR82 932 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 DAGLAQ9Y4D2 1042 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 COL4A1P02462 1669 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 ECE2O60344 883 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 RAD17O75943 681 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 C12orf60Q5U649 245 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 RBM28Q9NW13 759 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 AKAP11Q9UKA4 1901 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 IL1R1P14778 569 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 POLD1P28340 1107 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 NR5A1Q13285 461 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 OGFOD1Q8N543 542 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 PDILTQ8N807 584 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 MRPS27Q92552 414 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 USP25Q9UHP3 1055 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 BIN1O00499 593 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 SPECC1Q5M775 1068 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 CERS3Q8IU89 383 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 TTLL6Q8N841 843 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 CDK8P49336 464 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 EVCP57679 992 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 ISM2Q6H9L7 571 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 FLT1P17948 1338 aa10.03□□□□□ -0.8
CALCOCO2-201ENST00000258947 RBM26Q5T8P6 1007 aaKnown RBP10.02□□□□□ -0.8
CALCOCO2-201ENST00000258947 LRRC47Q8N1G4 583 aaKnown RBP10.02□□□□□ -0.8
CALCOCO2-201ENST00000258947 PGBD1Q96JS3 809 aa10.02□□□□□ -0.8
CALCOCO2-201ENST00000258947 CPVLQ9H3G5 476 aa10.02□□□□□ -0.8
CALCOCO2-201ENST00000258947 ANAPC4Q9UJX5 808 aa10.02□□□□□ -0.8
CALCOCO2-201ENST00000258947 PDS5AQ29RF7 1337 aaKnown RBP10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 SOGA3Q5TF21 947 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 GPKOWQ92917 476 aaPredicted RBP eCLIP10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 PCDHA7Q9UN72 937 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 MYO5AQ9Y4I1 1855 aaKnown RBP10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 KRT2P35908 639 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 CRKP46108 304 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 ELP1O95163 1332 aa10.02□□□□□ -0.81
CALCOCO2-201ENST00000258947 TCHHQ07283 1943 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 GPR75-ASB3A0A0A6YYF3 556 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 NOSTRINQ8IVI9 506 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 FBXL16Q8N461 479 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SALL1Q9NSC2 1324 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 ORC4O43929 436 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 DDAH1O94760 285 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 ANO6Q4KMQ2 910 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SBK1Q52WX2 424 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 ATL3Q6DD88 541 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CLEC10AQ8IUN9 316 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CLIP2Q9UDT6 1046 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SERPINB13Q9UIV8 391 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 BCS1LQ9Y276 419 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CCDC194A0A1B0GVG4 234 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CLRN2A0PK11 232 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 MARCH6O60337 910 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 PARP1P09874 1014 aaKnown RBP10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 TYRO3Q06418 890 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SPC24Q8NBT2 197 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 SUPT20HQ8NEM7 779 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 CAMKK2Q96RR4 588 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 DNAJC25Q9H1X3 360 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 RCOR1Q9UKL0 485 aa10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 FRMPD2Q68DX3 1309 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-201ENST00000258947 A0A087WWV3 80 aa10□□□□□ -0.81
CALCOCO2-201ENST00000258947 SYKP43405 635 aa10□□□□□ -0.81
CALCOCO2-201ENST00000258947 GNAQP50148 359 aa10□□□□□ -0.81
CALCOCO2-201ENST00000258947 PPP4CP60510 307 aa10□□□□□ -0.81
CALCOCO2-201ENST00000258947 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms