RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NFKBIEO00221 500 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 PICALMQ13492 652 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CATIPQ7Z7H3 387 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
VIM-201ENST00000224237 STK36Q9NRP7 1315 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CALM1P0DP23 149 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CALM2P0DP24 149 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CALM3P0DP25 149 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 IARSP41252 1262 aaKnown RBP21.15■□□□□ 0.98
VIM-201ENST00000224237 TFAP4Q01664 338 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 CCDC178Q5BJE1 867 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 TTC6Q86TZ1 520 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 UTRNP46939 3433 aa21.15■□□□□ 0.98
VIM-201ENST00000224237 DDAH1O94760 285 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 IFNAR1P17181 557 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 DNM1Q05193 864 aaKnown RBP21.14■□□□□ 0.97
VIM-201ENST00000224237 ILDR2Q71H61 639 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 FANCBQ8NB91 859 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 NUP133Q8WUM0 1156 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 C8orf76Q96K31 380 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 TAOK3Q9H2K8 898 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 DDX4Q9NQI0 724 aaKnown RBP21.14■□□□□ 0.97
VIM-201ENST00000224237 CNPY2Q9Y2B0 182 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 SRCAPQ6ZRS2 3230 aa21.14■□□□□ 0.97
VIM-201ENST00000224237 PSMD14O00487 310 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 NCLP19338 710 aaKnown RBP21.13■□□□□ 0.97
VIM-201ENST00000224237 CDK8P49336 464 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 RBM5P52756 815 aaKnown RBP eCLIP21.13■□□□□ 0.97
VIM-201ENST00000224237 KRT85P78386 507 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 RESTQ13127 1097 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 NMT2O60551 498 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 RASA1P20936 1047 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 DGKHQ86XP1 1220 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 SLC44A5Q8NCS7 719 aa21.13■□□□□ 0.97
VIM-201ENST00000224237 OSBPL5Q9H0X9 879 aaPredicted RBP21.13■□□□□ 0.97
VIM-201ENST00000224237 FOSBP53539 338 aa21.12■□□□□ 0.97
VIM-201ENST00000224237 SSRP1Q08945 709 aaKnown RBP21.12■□□□□ 0.97
VIM-201ENST00000224237 RSBN1LQ6PCB5 846 aaPredicted RBP21.12■□□□□ 0.97
VIM-201ENST00000224237 NIM1KQ8IY84 436 aa21.12■□□□□ 0.97
VIM-201ENST00000224237 PHKBQ93100 1093 aa21.12■□□□□ 0.97
VIM-201ENST00000224237 SPON1Q9HCB6 807 aa21.12■□□□□ 0.97
VIM-201ENST00000224237 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
VIM-201ENST00000224237 RBM28Q9NW13 759 aaKnown RBP21.12■□□□□ 0.97
VIM-201ENST00000224237 FMNL1O95466 1100 aaPredicted RBP21.11■□□□□ 0.97
VIM-201ENST00000224237 MBD3O95983 291 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 TROAPQ12815 778 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 TRIM22Q8IYM9 498 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 FBXO18Q8NFZ0 1043 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 ZBTB12Q9Y330 459 aaPredicted RBP21.11■□□□□ 0.97
VIM-201ENST00000224237 FIBPO43427 364 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 VIL1P09327 827 aaKnown RBP21.11■□□□□ 0.97
VIM-201ENST00000224237 CACNB3P54284 484 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 RASSF7Q02833 373 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 NFIAQ12857 509 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 WASF1Q92558 559 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 ALG1Q9BT22 464 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 IL17RBQ9NRM6 502 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 ZNRF3Q9ULT6 936 aa21.11■□□□□ 0.97
VIM-201ENST00000224237 GABPAQ06546 454 aa21.1■□□□□ 0.97
VIM-201ENST00000224237 RCSD1Q6JBY9 416 aa21.1■□□□□ 0.97
VIM-201ENST00000224237 IDI2Q9BXS1 227 aa21.1■□□□□ 0.97
VIM-201ENST00000224237 SLC26A6Q9BXS9 759 aa21.1■□□□□ 0.97
VIM-201ENST00000224237 NPM3O75607 178 aaKnown RBP21.09■□□□□ 0.97
VIM-201ENST00000224237 HLA-DOAP06340 250 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 GUCY1B3Q02153 619 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 KAT14Q9H8E8 782 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 SWAP70Q9UH65 585 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 MYH15Q9Y2K3 1946 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 PRELPP51888 382 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 FAM173BQ6P4H8 233 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 CTCFLQ8NI51 663 aaPredicted RBP21.09■□□□□ 0.97
VIM-201ENST00000224237 GPT2Q8TD30 523 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 GZF1Q9H116 711 aaPredicted RBP21.09■□□□□ 0.97
VIM-201ENST00000224237 SERPINB13Q9UIV8 391 aa21.09■□□□□ 0.97
VIM-201ENST00000224237 NBPF11Q86T75 865 aa21.08■□□□□ 0.97
VIM-201ENST00000224237 CRACR2BQ8N4Y2 399 aaPredicted RBP21.08■□□□□ 0.97
VIM-201ENST00000224237 NEDD1Q8NHV4 660 aa21.08■□□□□ 0.97
VIM-201ENST00000224237 GMLQ99445 158 aa21.08■□□□□ 0.97
VIM-201ENST00000224237 RNF26Q9BY78 433 aaPredicted RBP21.08■□□□□ 0.97
VIM-201ENST00000224237 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.97
VIM-201ENST00000224237 DHX36Q9H2U1 1008 aaKnown RBP21.08■□□□□ 0.97
VIM-201ENST00000224237 HDAC9Q9UKV0 1011 aa21.08■□□□□ 0.97
VIM-201ENST00000224237 ARFGEF1Q9Y6D6 1849 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 MYH8P13535 1937 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 DEXIO95424 95 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 CXCL9Q07325 125 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 ZFPM1Q8IX07 1006 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 EHD4Q9H223 541 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 ELP1O95163 1332 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 JDP2Q8WYK2 163 aa21.07■□□□□ 0.96
VIM-201ENST00000224237 MAP3K14Q99558 947 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms