RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MOB2Q70IA6 237 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 NLRP7Q8WX94 980 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
SDF2-208ENST00000589788 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
SDF2-208ENST00000589788 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
SDF2-208ENST00000589788 AOC2O75106 756 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 LDHCP07864 332 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
SDF2-208ENST00000589788 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
SDF2-208ENST00000589788 MAP2K2P36507 400 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 MAP2K1Q02750 393 aaPredicted RBP12.65□□□□□ -0.38
SDF2-208ENST00000589788 MECOMQ03112 1051 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 NOGQ13253 232 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 NBPF12Q5TAG4 269 aaPredicted RBP12.65□□□□□ -0.38
SDF2-208ENST00000589788 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 CDC42EP5Q6NZY7 148 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 AIDAQ96BJ3 306 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 USP40Q9NVE5 1235 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 THSD7BQ9C0I4 1608 aa12.65□□□□□ -0.38
SDF2-208ENST00000589788 OATP04181 439 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 FAM83AQ86UY5 434 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
SDF2-208ENST00000589788 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 LRRCC1Q9C099 1032 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 MROH7-TTC4A0A0A0MT08 1334 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 GAKO14976 1311 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
SDF2-208ENST00000589788 SNPHO15079 494 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
SDF2-208ENST00000589788 SLC10A3P09131 477 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 BTDP43251 543 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 ZAP70P43403 619 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 IREB2P48200 963 aaKnown RBP12.63□□□□□ -0.39
SDF2-208ENST00000589788 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
SDF2-208ENST00000589788 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
SDF2-208ENST00000589788 TCP10Q12799 353 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 RASAL3Q86YV0 1011 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 FZD1Q9UP38 647 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 MAST2Q6P0Q8 1798 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 SMARCA5O60264 1052 aaPredicted RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 IGSF3O75054 1194 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 FAM151AQ8WW52 585 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 SLC10A4Q96EP9 437 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
SDF2-208ENST00000589788 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
SDF2-208ENST00000589788 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
SDF2-208ENST00000589788 UNCXA6NJT0 531 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
SDF2-208ENST00000589788 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
SDF2-208ENST00000589788 NFIAQ12857 509 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 AAMPQ13685 434 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
SDF2-208ENST00000589788 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 ZNF384Q8TF68 577 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
SDF2-208ENST00000589788 TSKSQ9UJT2 592 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 NDUFB9Q9Y6M9 179 aa12.61□□□□□ -0.39
SDF2-208ENST00000589788 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 FOXN1O15353 648 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 ENTPD3O75355 529 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 BAG3O95817 575 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
SDF2-208ENST00000589788 CTCFP49711 727 aaPredicted RBP12.6□□□□□ -0.39
SDF2-208ENST00000589788 RGS3P49796 1198 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 PICALMQ13492 652 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 ZSCAN29Q8IWY8 852 aaPredicted RBP12.6□□□□□ -0.39
SDF2-208ENST00000589788 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.6□□□□□ -0.39
SDF2-208ENST00000589788 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 ZIC5Q96T25 663 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
SDF2-208ENST00000589788 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
SDF2-208ENST00000589788 CA12O43570 354 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 NEFLP07196 543 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 ATP5JP18859 108 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 CYP7A1P22680 504 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 CLMNQ96JQ2 1002 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 ANTXR1Q9H6X2 564 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms