RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 TBC1D12O60347 775 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 SLURP2P0DP57 97 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 MAP3K10Q02779 954 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 MIGA2Q7L4E1 593 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 TRIM34Q9BYJ4 488 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 ZNF408Q9H9D4 720 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
SPG7-218ENST00000568205 ANAPC4Q9UJX5 808 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
SPG7-218ENST00000568205 FAM196BA6NMK8 535 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 EPB41L2O43491 1005 aaKnown RBP18.69■□□□□ 0.58
SPG7-218ENST00000568205 CELF2O95319 508 aaKnown RBP18.69■□□□□ 0.58
SPG7-218ENST00000568205 HAND2P61296 217 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 GABPAQ06546 454 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
SPG7-218ENST00000568205 DYNLL2Q96FJ2 89 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
SPG7-218ENST00000568205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPG7-218ENST00000568205 ZNF213O14771 459 aa18.68■□□□□ 0.58
SPG7-218ENST00000568205 PPP1R12BO60237 982 aaPredicted RBP18.68■□□□□ 0.58
SPG7-218ENST00000568205 SLC3A2P08195 630 aaKnown RBP18.68■□□□□ 0.58
SPG7-218ENST00000568205 PRKG1Q13976 671 aa18.68■□□□□ 0.58
SPG7-218ENST00000568205 C16orf86Q6ZW13 317 aa18.68■□□□□ 0.58
SPG7-218ENST00000568205 SLC44A5Q8NCS7 719 aa18.68■□□□□ 0.58
SPG7-218ENST00000568205 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
SPG7-218ENST00000568205 SEC24BO95487 1268 aa18.67■□□□□ 0.58
SPG7-218ENST00000568205 CTDSPL2Q05D32 466 aa18.67■□□□□ 0.58
SPG7-218ENST00000568205 USP26Q9BXU7 913 aa18.67■□□□□ 0.58
SPG7-218ENST00000568205 NBPF3Q9H094 633 aa18.67■□□□□ 0.58
SPG7-218ENST00000568205 FZD1Q9UP38 647 aa18.67■□□□□ 0.58
SPG7-218ENST00000568205 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
SPG7-218ENST00000568205 USP2O75604 605 aaPredicted RBP18.66■□□□□ 0.58
SPG7-218ENST00000568205 CYP21A2P08686 494 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 SHMT1P34896 483 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 CDK8P49336 464 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 FKBP1BP68106 108 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 TTLL12Q14166 644 aaPredicted RBP18.66■□□□□ 0.58
SPG7-218ENST00000568205 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 CST9Q5W186 159 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 CREB3L3Q68CJ9 461 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 STK11IPQ8N1F8 1099 aa18.66■□□□□ 0.58
SPG7-218ENST00000568205 GBA2Q9HCG7 927 aaPredicted RBP18.66■□□□□ 0.58
SPG7-218ENST00000568205 MYH1P12882 1939 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 BAZ2AQ9UIF9 1905 aaKnown RBP18.65■□□□□ 0.58
SPG7-218ENST00000568205 SLC27A2O14975 620 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 IREB2P48200 963 aaKnown RBP18.65■□□□□ 0.58
SPG7-218ENST00000568205 PDE4BQ07343 736 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 MAP3K11Q16584 847 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 TATDN1Q6P1N9 297 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 ARMC9Q7Z3E5 817 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 KLRG1Q96E93 195 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 ZNF112Q9UJU3 913 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
SPG7-218ENST00000568205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
SPG7-218ENST00000568205 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
SPG7-218ENST00000568205 PHF20L1A8MW92 1017 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 FGRP09769 529 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 RNF20Q5VTR2 975 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 MOB2Q70IA6 237 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 C2orf69Q8N8R5 385 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPG7-218ENST00000568205 STAG1Q8WVM7 1258 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 RNF41Q9H4P4 317 aaPredicted RBP18.64■□□□□ 0.57
SPG7-218ENST00000568205 MKNK2Q9HBH9 465 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
SPG7-218ENST00000568205 ORC4O43929 436 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 PRDM1O75626 825 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 PCP11498 1178 aaKnown RBP18.63■□□□□ 0.57
SPG7-218ENST00000568205 HSPA4P34932 840 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 RRP1BQ14684 758 aaKnown RBP18.63■□□□□ 0.57
SPG7-218ENST00000568205 MFSD6Q6ZSS7 791 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 BACH2Q9BYV9 841 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 INCENPQ9NQS7 918 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 TAF6LQ9Y6J9 622 aa18.63■□□□□ 0.57
SPG7-218ENST00000568205 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 RASA1P20936 1047 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 MCCP23508 829 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 INPP5BP32019 993 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
SPG7-218ENST00000568205 KCNB2Q92953 911 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 LAMB1P07942 1786 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 PAPPA2Q9BXP8 1791 aa18.62■□□□□ 0.57
SPG7-218ENST00000568205 NEDD4P46934 1319 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 TMEM88BA6NKF7 163 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
SPG7-218ENST00000568205 GDF11O95390 407 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
SPG7-218ENST00000568205 CAP2P40123 477 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 LDLRAD1Q5T700 205 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
SPG7-218ENST00000568205 STOX1Q6ZVD7 989 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 ANKRD13AQ8IZ07 590 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms