RNA–Protein interactions for RNA: ENST00000565898.5

PML-215, Transcript of promyelocytic leukemia, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 5,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PML-215	ENST00000565898	SMC6	Q96SB8	1091 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	NAP1L4	Q99733	375 aa	Known RBP	18.21	■□□□□ 0.51
PML-215	ENST00000565898	SAP30BP	Q9UHR5	308 aa	Known RBP	18.21	■□□□□ 0.51
PML-215	ENST00000565898	RGS12	O14924	1447 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	TXK	P42681	527 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	FMNL3	Q8IVF7	1028 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	IFT20	Q8IY31	132 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	GOLGA6B	A6NDN3	693 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	MRPL12	P52815	198 aa	Known RBP	18.21	■□□□□ 0.51
PML-215	ENST00000565898	AKNAD1	Q5T1N1	836 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	RABEP2	Q9H5N1	569 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	SERTAD1	Q9UHV2	236 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	MAGEA1	P43355	309 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	GBP6	Q6ZN66	633 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	NELFB	Q8WX92	580 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	SLC52A2	Q9HAB3	445 aa		18.21	■□□□□ 0.51
PML-215	ENST00000565898	VIM	P08670	466 aa	Known RBP	18.2	■□□□□ 0.5
PML-215	ENST00000565898	SETDB1	Q15047	1291 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	TTC6	Q86TZ1	520 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	CCDC63	Q8NA47	563 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	SH3TC1	Q8TE82	1336 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	A1BG	P04217	495 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	ASIC2	Q16515	512 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	BEND3	Q5T5X7	828 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.2	■□□□□ 0.5
PML-215	ENST00000565898	FRMD4B	Q9Y2L6	1034 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	ERCC6L	Q2NKX8	1250 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	NAP1L3	Q99457	506 aa	Predicted RBP	18.2	■□□□□ 0.5
PML-215	ENST00000565898	ZNF532	Q9HCE3	1301 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	PDE8A	O60658	829 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	PSMB7	Q99436	277 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	GPCPD1	Q9NPB8	672 aa		18.2	■□□□□ 0.5
PML-215	ENST00000565898	ZNF215	Q9UL58	517 aa	Predicted RBP	18.2	■□□□□ 0.5
PML-215	ENST00000565898	TEX11	Q8IYF3	940 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	ZBTB21	Q9ULJ3	1066 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	ARHGEF10	O15013	1369 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	SLC9C1	Q4G0N8	1177 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	GPIHBP1	Q8IV16	184 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	EAF2	Q96CJ1	260 aa	Predicted RBP	18.19	■□□□□ 0.5
PML-215	ENST00000565898	ZNF274	Q96GC6	653 aa	Predicted RBP	18.19	■□□□□ 0.5
PML-215	ENST00000565898	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.19	■□□□□ 0.5
PML-215	ENST00000565898	INPP5B	P32019	993 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	C19orf44	Q9H6X5	657 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	WWC3	Q9ULE0	1092 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	TNFAIP3	P21580	790 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	PPP2R5B	Q15173	497 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	BLZF1	Q9H2G9	400 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	NKIRAS1	Q9NYS0	192 aa		18.19	■□□□□ 0.5
PML-215	ENST00000565898	CETN3	O15182	167 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	GPR161	Q8N6U8	529 aa	Known RBP	18.18	■□□□□ 0.5
PML-215	ENST00000565898	KAT6B	Q8WYB5	2073 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	ABCC2	Q92887	1545 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	SPOP	O43791	374 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	hCG_1642624	A0A1W2PR95	340 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	CD2BP2	O95400	341 aa	Known RBP	18.18	■□□□□ 0.5
PML-215	ENST00000565898	LPIN2	Q92539	896 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	TBX22	Q9Y458	520 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	MAGI2	Q86UL8	1455 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	NEURL1B	A8MQ27	555 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	PFKFB2	O60825	505 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
PML-215	ENST00000565898	LRRC8A	Q8IWT6	810 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	MRFAP1L1	Q96HT8	127 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	TAF5L	O75529	589 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898	SEC62	Q99442	399 aa	Known RBP	18.18	■□□□□ 0.5
PML-215	ENST00000565898	VPS54	Q9P1Q0	977 aa		18.18	■□□□□ 0.5
PML-215	ENST00000565898		A6NNZ2	444 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	TUBB8	Q3ZCM7	444 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	HDAC9	Q9UKV0	1011 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	ACTN4	O43707	911 aa	Known RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	LRRC45	Q96CN5	670 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	HIBADH	P31937	336 aa	Known RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	LACTB	P83111	547 aa	Predicted RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	FAM212A	Q96EL1	285 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	ZNF496	Q96IT1	587 aa	Predicted RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	LRWD1	Q9UFC0	647 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	KDM5A	P29375	1690 aa	Known RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	ERCC3	P19447	782 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	NONO	Q15233	471 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	OGFOD1	Q8N543	542 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	KIAA1524	Q8TCG1	905 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	DESI2	Q9BSY9	194 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	TRIM31	Q9BZY9	425 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	PYCARD	Q9ULZ3	195 aa		18.17	■□□□□ 0.5
PML-215	ENST00000565898	UTP11	Q9Y3A2	253 aa	Known RBP	18.17	■□□□□ 0.5
PML-215	ENST00000565898	PLXNC1	O60486	1568 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	SPATA24	Q86W54	205 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	MPHOSPH6	Q99547	160 aa	Known RBP	18.16	■□□□□ 0.5
PML-215	ENST00000565898	FAM135B	Q49AJ0	1406 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	CEP104	O60308	925 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	IRX3	P78415	501 aa	Predicted RBP	18.16	■□□□□ 0.5
PML-215	ENST00000565898	INTS8	Q75QN2	995 aa	Known RBP	18.16	■□□□□ 0.5
PML-215	ENST00000565898	POTED	Q86YR6	584 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	KLHL7	Q8IXQ5	586 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	SPATA5	Q8NB90	893 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
PML-215	ENST00000565898	RIMBP2	O15034	1052 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	DPH6	Q7L8W6	267 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	DYM	Q7RTS9	669 aa		18.16	■□□□□ 0.5
PML-215	ENST00000565898	SNX29	Q8TEQ0	813 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms