RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 BLZF1Q9H2G9 400 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.59
GTF3C1-202ENST00000561623 ATP6V1AP38606 617 aa11.4□□□□□ -0.59
GTF3C1-202ENST00000561623 SEPT14Q6ZU15 432 aa11.4□□□□□ -0.59
GTF3C1-202ENST00000561623 SV2BQ7L1I2 683 aa11.4□□□□□ -0.59
GTF3C1-202ENST00000561623 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.59
GTF3C1-202ENST00000561623 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 ATP5DP30049 168 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 LRRC45Q96CN5 670 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 PICALMQ13492 652 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 ASIC2Q16515 512 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TSNAXIP1Q2TAA8 658 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 CFAP157Q5JU67 520 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 RUFY4Q6ZNE9 571 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 RRP36Q96EU6 259 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 CFAP57Q96MR6 1250 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 DDX23Q9BUQ8 820 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 A6NNZ2 444 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 FYB2Q5VWT5 728 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 SPOPO43791 374 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 DIS3L2Q8IYB7 885 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TPD52P55327 224 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 NELFBQ8WX92 580 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 TIMM10P62072 90 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 ARHGEF6Q15052 776 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 BANK1Q8NDB2 785 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-202ENST00000561623 ACTN4O43707 911 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 MAGEA1P43355 309 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 MCUR1Q96AQ8 359 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 SAR1BQ9Y6B6 198 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 MBD4O95243 580 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 CAPS2Q9BXY5 557 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 RRP15Q9Y3B9 282 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 PEX19P40855 299 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 LRRC59Q96AG4 307 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 CD2BP2O95400 341 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 GOLGA8FQ08AF8 430 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 GOLGA8DPQ0D2H9 430 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 KCNJ14Q9UNX9 436 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 ATP2A2P16615 1042 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 CCT5P48643 541 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 SMARCC2Q8TAQ2 1214 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 PPP1R13BQ96KQ4 1090 aa11.38□□□□□ -0.59
GTF3C1-202ENST00000561623 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 USP37Q86T82 979 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 RAB3IL1Q8TBN0 382 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 SERTAD1Q9UHV2 236 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 TNFAIP3P21580 790 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 PTPN21Q16825 1174 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 DEXIO95424 95 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 ETF1P62495 437 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 WHAMMP3Q1A5X7 153 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 ANKRD42Q8N9B4 389 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 GNAT2P19087 354 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC38Q502W7 563 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 AKAP4Q5JQC9 854 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 KRT40Q6A162 431 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 NUP160Q12769 1436 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 PFKFB1P16118 471 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 GSTO1P78417 241 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 ZBTB21Q9ULJ3 1066 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 TXNDC9O14530 226 aa11.37□□□□□ -0.59
GTF3C1-202ENST00000561623 PTPROQ16827 1216 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 TAOK1Q7L7X3 1001 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC170Q8IYT3 715 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 TBC1D31Q96DN5 1066 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 FAM204AQ9H8W3 233 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 KRT5P13647 590 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CNGA1P29973 690 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 HSPA1LP34931 641 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 PLCD1P51178 756 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms