RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
HNRNPC-223ENST00000556142 EYA3Q99504 573 aa11.12□□□□□ -0.63
HNRNPC-223ENST00000556142 CCDC88AQ3V6T2 1871 aa11.12□□□□□ -0.63
HNRNPC-223ENST00000556142 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
HNRNPC-223ENST00000556142 ORC4O43929 436 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 BAG3O95817 575 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 CYP2D6P10635 497 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 C12orf60Q5U649 245 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 ARPP21Q9UBL0 812 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 CDC27P30260 824 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 BTDP43251 543 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 RESTQ13127 1097 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 NTRK3Q16288 839 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 PODNQ7Z5L7 613 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
HNRNPC-223ENST00000556142 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 ADD1P35611 737 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 RASSF7Q02833 373 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 RAB11FIP4Q86YS3 637 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 RGS22Q8NE09 1264 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 ESR2Q92731 530 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 MXD3Q9BW11 206 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 TMX4Q9H1E5 349 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
HNRNPC-223ENST00000556142 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 SBF1O95248 1867 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 ZBTB43O43298 467 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 DEKP35659 375 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 RCAN1P53805 252 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 WTAPQ15007 396 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 TMTC2Q8N394 836 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 MRIQ9BWK5 157 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 MCM9Q9NXL9 1143 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 NAP1L2Q9ULW6 460 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
HNRNPC-223ENST00000556142 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 PLCG2P16885 1265 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 LMNB1P20700 586 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 USP5P45974 858 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 NT5C2P49902 561 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 KIAA2012Q0VF49 1180 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 FOXD4L6Q3SYB3 417 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 DACT2Q5SW24 774 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 FOXD4L3Q6VB84 417 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 DBNDD1Q9H9R9 158 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 TNKSO95271 1327 aa11.08□□□□□ -0.64
HNRNPC-223ENST00000556142 CCDC69A6NI79 296 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 GADD45BO75293 160 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 PRDM1O75626 825 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 RXRAP19793 462 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 PLCD1P51178 756 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 HHIPL2Q6UWX4 724 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 ORC3Q9UBD5 711 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 LAMB1P07942 1786 aa11.07□□□□□ -0.64
HNRNPC-223ENST00000556142 DDX60LQ5H9U9 1706 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms