RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TBC1D8O95759 1140 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 MX1P20591 662 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 USP5P45974 858 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
GPN3-202ENST00000537466 ZBTB47Q9UFB7 747 aaPredicted RBP20.94■□□□□ 0.94
GPN3-202ENST00000537466 PPATQ06203 517 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 PPIL2Q13356 520 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 SCYL3Q8IZE3 742 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 LCORLQ8N3X6 602 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 PI4KBQ9UBF8 816 aa20.94■□□□□ 0.94
GPN3-202ENST00000537466 GTF2A2P52657 109 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 B4GALNT3Q6L9W6 998 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 KBTBD3Q8NAB2 608 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 BRI3BPQ8WY22 251 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 R3HDMLQ9H3Y0 253 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 DNAJC18Q9H819 358 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 ARMT1Q9H993 441 aa20.93■□□□□ 0.94
GPN3-202ENST00000537466 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.93■□□□□ 0.94
GPN3-202ENST00000537466 CCL15-CCL14A0A0B4J2E2 113 aa20.92■□□□□ 0.94
GPN3-202ENST00000537466 ERC2O15083 957 aa20.92■□□□□ 0.94
GPN3-202ENST00000537466 CTNND1O60716 968 aaKnown RBP20.92■□□□□ 0.94
GPN3-202ENST00000537466 RRP1BQ14684 758 aaKnown RBP20.92■□□□□ 0.94
GPN3-202ENST00000537466 UBE3CQ15386 1083 aa20.92■□□□□ 0.94
GPN3-202ENST00000537466 CCL15Q16663 113 aa20.92■□□□□ 0.94
GPN3-202ENST00000537466 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
GPN3-202ENST00000537466 HERC5Q9UII4 1024 aaKnown RBP20.92■□□□□ 0.94
GPN3-202ENST00000537466 MYH8P13535 1937 aa20.91■□□□□ 0.94
GPN3-202ENST00000537466 GLRX3O76003 335 aaKnown RBP20.91■□□□□ 0.94
GPN3-202ENST00000537466 MBD4O95243 580 aa20.91■□□□□ 0.94
GPN3-202ENST00000537466 PTPRAP18433 802 aa20.91■□□□□ 0.94
GPN3-202ENST00000537466 METTL16Q86W50 562 aaKnown RBP20.91■□□□□ 0.94
GPN3-202ENST00000537466 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
GPN3-202ENST00000537466 CRNKL1Q9BZJ0 848 aaKnown RBP20.91■□□□□ 0.94
GPN3-202ENST00000537466 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
GPN3-202ENST00000537466 ZSCAN25Q6NSZ9 544 aa20.9■□□□□ 0.94
GPN3-202ENST00000537466 CFHR5Q9BXR6 569 aa20.9■□□□□ 0.94
GPN3-202ENST00000537466 PUS7LQ9H0K6 701 aaKnown RBP20.9■□□□□ 0.94
GPN3-202ENST00000537466 PICK1Q9NRD5 415 aa20.9■□□□□ 0.94
GPN3-202ENST00000537466 HLA-DOAP06340 250 aa20.89■□□□□ 0.94
GPN3-202ENST00000537466 SNAPC2Q13487 334 aa20.89■□□□□ 0.94
GPN3-202ENST00000537466 CCDC84Q86UT8 332 aaPredicted RBP20.89■□□□□ 0.94
GPN3-202ENST00000537466 FOXP4Q8IVH2 680 aaPredicted RBP20.89■□□□□ 0.94
GPN3-202ENST00000537466 TNS4Q8IZW8 715 aa20.89■□□□□ 0.94
GPN3-202ENST00000537466 STAP2Q9UGK3 403 aa20.89■□□□□ 0.94
GPN3-202ENST00000537466 KCNH4Q9UQ05 1017 aa20.89■□□□□ 0.94
GPN3-202ENST00000537466 PRKAB2O43741 272 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 CETPP11597 493 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 PDE1AP54750 535 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 CRACR2BQ8N4Y2 399 aaPredicted RBP20.88■□□□□ 0.93
GPN3-202ENST00000537466 ZHX2Q9Y6X8 837 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 CAP2P40123 477 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 NUCB1Q02818 461 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 EVX2Q03828 476 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 OTUD7BQ6GQQ9 843 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 DCP1AQ9NPI6 582 aaPredicted RBP20.88■□□□□ 0.93
GPN3-202ENST00000537466 AFG3L2Q9Y4W6 797 aa20.88■□□□□ 0.93
GPN3-202ENST00000537466 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
GPN3-202ENST00000537466 PLCD1P51178 756 aa20.87■□□□□ 0.93
GPN3-202ENST00000537466 JAG1P78504 1218 aa20.87■□□□□ 0.93
GPN3-202ENST00000537466 CRHR2Q13324 411 aa20.87■□□□□ 0.93
GPN3-202ENST00000537466 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
GPN3-202ENST00000537466 TRIM34Q9BYJ4 488 aa20.87■□□□□ 0.93
GPN3-202ENST00000537466 BTBD19C9JJ37 291 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 GPR25O00155 361 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 MOGSQ13724 837 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
GPN3-202ENST00000537466 OSBP2Q969R2 916 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 EHD4Q9H223 541 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 LOC285556D6RIA3 1793 aa20.86■□□□□ 0.93
GPN3-202ENST00000537466 GDF11O95390 407 aa20.85■□□□□ 0.93
GPN3-202ENST00000537466 POLR3DP05423 398 aaPredicted RBP20.85■□□□□ 0.93
GPN3-202ENST00000537466 TTC6Q86TZ1 520 aa20.85■□□□□ 0.93
GPN3-202ENST00000537466 APPBP2Q92624 585 aa20.85■□□□□ 0.93
GPN3-202ENST00000537466 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
GPN3-202ENST00000537466 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
GPN3-202ENST00000537466 CXCL11O14625 94 aa20.84■□□□□ 0.93
GPN3-202ENST00000537466 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
GPN3-202ENST00000537466 CYP2D6P10635 497 aa20.84■□□□□ 0.93
GPN3-202ENST00000537466 SLC4A4Q9Y6R1 1079 aa20.84■□□□□ 0.93
GPN3-202ENST00000537466 TRIM75PA6NK02 468 aa20.83■□□□□ 0.93
GPN3-202ENST00000537466 TAF1CQ15572 869 aaPredicted RBP20.83■□□□□ 0.93
GPN3-202ENST00000537466 NOM1Q5C9Z4 860 aaKnown RBP20.83■□□□□ 0.93
GPN3-202ENST00000537466 STRBPQ96SI9 672 aaKnown RBP20.83■□□□□ 0.93
GPN3-202ENST00000537466 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
GPN3-202ENST00000537466 A0A0G2JLL6 359 aaPredicted RBP20.82■□□□□ 0.92
GPN3-202ENST00000537466 M0R2C6 588 aa20.82■□□□□ 0.92
GPN3-202ENST00000537466 TATDN1Q6P1N9 297 aa20.82■□□□□ 0.92
GPN3-202ENST00000537466 PRRT2Q7Z6L0 340 aaPredicted RBP20.82■□□□□ 0.92
GPN3-202ENST00000537466 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
GPN3-202ENST00000537466 SEC62Q99442 399 aaKnown RBP20.82■□□□□ 0.92
GPN3-202ENST00000537466 ZSWIM8A7E2V4 1837 aa20.82■□□□□ 0.92
GPN3-202ENST00000537466 SMIM22K7EJ46 135 aa20.81■□□□□ 0.92
GPN3-202ENST00000537466 SHMT1P34896 483 aa20.81■□□□□ 0.92
GPN3-202ENST00000537466 GABPAQ06546 454 aa20.81■□□□□ 0.92
GPN3-202ENST00000537466 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
GPN3-202ENST00000537466 CYP2D7A0A087X1C5 515 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms