RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 NBPF12Q5TAG4 269 aaPredicted RBP28.82■■■□□ 2.2
HMGA2-207ENST00000537275 RNF20Q5VTR2 975 aa28.82■■■□□ 2.2
HMGA2-207ENST00000537275 FOXP4Q8IVH2 680 aaPredicted RBP28.82■■■□□ 2.2
HMGA2-207ENST00000537275 KCNB2Q92953 911 aa28.82■■■□□ 2.2
HMGA2-207ENST00000537275 SERPINB13Q9UIV8 391 aa28.82■■■□□ 2.2
HMGA2-207ENST00000537275 CTDSPL2Q05D32 466 aa28.81■■■□□ 2.2
HMGA2-207ENST00000537275 GABPAQ06546 454 aa28.81■■■□□ 2.2
HMGA2-207ENST00000537275 CHADLQ6NUI6 762 aa28.81■■■□□ 2.2
HMGA2-207ENST00000537275 DLK2Q6UY11 383 aa28.81■■■□□ 2.2
HMGA2-207ENST00000537275 UPF2Q9HAU5 1272 aaKnown RBP28.81■■■□□ 2.2
HMGA2-207ENST00000537275 TAF6LQ9Y6J9 622 aa28.8■■■□□ 2.2
HMGA2-207ENST00000537275 MCCP23508 829 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 MAP3K10Q02779 954 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 TBC1D10CQ8IV04 446 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 RASEFQ8IZ41 740 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 DYNLL2Q96FJ2 89 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 TAOK2Q9UL54 1235 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 TBC1D12O60347 775 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 SLURP2P0DP57 97 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 TSGA10IPQ3SY00 556 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 C16orf86Q6ZW13 317 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 HERC5Q9UII4 1024 aaKnown RBP28.79■■■□□ 2.2
HMGA2-207ENST00000537275 TACC3Q9Y6A5 838 aa28.79■■■□□ 2.2
HMGA2-207ENST00000537275 SLC3A2P08195 630 aaKnown RBP28.78■■■□□ 2.2
HMGA2-207ENST00000537275 FGRP09769 529 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 SUPT20HL1Q3ZLR7 823 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 AKNAD1Q5T1N1 836 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 STK11IPQ8N1F8 1099 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 STAG1Q8WVM7 1258 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 CDCA5Q96FF9 252 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 C22orf23Q9BZE7 217 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 DNAJC18Q9H819 358 aa28.78■■■□□ 2.2
HMGA2-207ENST00000537275 ZKSCAN1P17029 563 aaPredicted RBP28.77■■■□□ 2.2
HMGA2-207ENST00000537275 CRACR2BQ8N4Y2 399 aaPredicted RBP28.77■■■□□ 2.2
HMGA2-207ENST00000537275 HOOK2Q96ED9 719 aa28.77■■■□□ 2.2
HMGA2-207ENST00000537275 SNX14Q9Y5W7 946 aa28.77■■■□□ 2.2
HMGA2-207ENST00000537275 SLC44A5Q8NCS7 719 aa28.76■■■□□ 2.19
HMGA2-207ENST00000537275 INCENPQ9NQS7 918 aa28.76■■■□□ 2.19
HMGA2-207ENST00000537275 SWAP70Q9UH65 585 aa28.76■■■□□ 2.19
HMGA2-207ENST00000537275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.76■■■□□ 2.19
HMGA2-207ENST00000537275 SSC5DA1L4H1 1573 aa28.76■■■□□ 2.19
HMGA2-207ENST00000537275 FAM196BA6NMK8 535 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 E7EWF7 191 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 PCP11498 1178 aaKnown RBP28.75■■■□□ 2.19
HMGA2-207ENST00000537275 CDK8P49336 464 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 RBM25P49756 843 aaKnown RBP28.75■■■□□ 2.19
HMGA2-207ENST00000537275 PDE4BQ07343 736 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 MFSD6Q6ZSS7 791 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 MIGA2Q7L4E1 593 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 TRIM34Q9BYJ4 488 aa28.75■■■□□ 2.19
HMGA2-207ENST00000537275 RNF41Q9H4P4 317 aaPredicted RBP28.75■■■□□ 2.19
HMGA2-207ENST00000537275 TRAF5O00463 557 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 ITGBL1O95965 494 aaPredicted RBP28.74■■■□□ 2.19
HMGA2-207ENST00000537275 STOX1Q6ZVD7 989 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 SMC1BQ8NDV3 1235 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.74■■■□□ 2.19
HMGA2-207ENST00000537275 TOMM70O94826 608 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 ANAPC15P60006 121 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 TBC1D32Q96NH3 1257 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 ZNF287Q9HBT7 754 aa28.74■■■□□ 2.19
HMGA2-207ENST00000537275 SHMT1P34896 483 aa28.73■■■□□ 2.19
HMGA2-207ENST00000537275 NF2P35240 595 aa28.73■■■□□ 2.19
HMGA2-207ENST00000537275 DCAF15Q66K64 600 aa28.73■■■□□ 2.19
HMGA2-207ENST00000537275 TATDN1Q6P1N9 297 aa28.73■■■□□ 2.19
HMGA2-207ENST00000537275 IL17RAQ96F46 866 aa28.73■■■□□ 2.19
HMGA2-207ENST00000537275 ORC4O43929 436 aa28.72■■■□□ 2.19
HMGA2-207ENST00000537275 KRT32Q14532 448 aa28.72■■■□□ 2.19
HMGA2-207ENST00000537275 ZNF408Q9H9D4 720 aa28.72■■■□□ 2.19
HMGA2-207ENST00000537275 MKNK2Q9HBH9 465 aa28.72■■■□□ 2.19
HMGA2-207ENST00000537275 NEDD4P46934 1319 aa28.71■■■□□ 2.19
HMGA2-207ENST00000537275 PRDM1O75626 825 aa28.71■■■□□ 2.19
HMGA2-207ENST00000537275 FMR1Q06787 632 aaKnown RBP eCLIP28.71■■■□□ 2.19
HMGA2-207ENST00000537275 ADCK5Q3MIX3 580 aa28.71■■■□□ 2.19
HMGA2-207ENST00000537275 RBM46Q8TBY0 533 aaKnown RBP28.71■■■□□ 2.19
HMGA2-207ENST00000537275 RASA1P20936 1047 aa28.7■■■□□ 2.19
HMGA2-207ENST00000537275 CNNM2Q9H8M5 875 aa28.7■■■□□ 2.19
HMGA2-207ENST00000537275 PHF20L1A8MW92 1017 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 PRKG1Q13976 671 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 ZNF341Q9BYN7 854 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 TRDNQ13061 729 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 ZNF444Q8N0Y2 327 aaPredicted RBP28.69■■■□□ 2.18
HMGA2-207ENST00000537275 NCOA7Q8NI08 942 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 NKX2-3Q8TAU0 364 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 KRT23Q9C075 422 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 TOMM22Q9NS69 142 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 ZNF112Q9UJU3 913 aa28.69■■■□□ 2.18
HMGA2-207ENST00000537275 MYH8P13535 1937 aa28.68■■■□□ 2.18
HMGA2-207ENST00000537275 PPP1R12BO60237 982 aaPredicted RBP28.68■■■□□ 2.18
HMGA2-207ENST00000537275 USP2O75604 605 aaPredicted RBP28.68■■■□□ 2.18
HMGA2-207ENST00000537275 NT5C2P49902 561 aa28.68■■■□□ 2.18
HMGA2-207ENST00000537275 RRP1BQ14684 758 aaKnown RBP28.68■■■□□ 2.18
HMGA2-207ENST00000537275 RRP12Q5JTH9 1297 aaKnown RBP28.68■■■□□ 2.18
HMGA2-207ENST00000537275 NEK1Q96PY6 1258 aa28.68■■■□□ 2.18
HMGA2-207ENST00000537275 FZD1Q9UP38 647 aa28.68■■■□□ 2.18
HMGA2-207ENST00000537275 B4E1Z4 1266 aa28.67■■■□□ 2.18
HMGA2-207ENST00000537275 TTLL12Q14166 644 aaPredicted RBP28.67■■■□□ 2.18
HMGA2-207ENST00000537275 CERKLQ49MI3 558 aaPredicted RBP28.67■■■□□ 2.18
HMGA2-207ENST00000537275 KLRG1Q96E93 195 aa28.67■■■□□ 2.18
HMGA2-207ENST00000537275 CCDC17Q96LX7 622 aa28.67■■■□□ 2.18
HMGA2-207ENST00000537275 KIF2CQ99661 725 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms