RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 TAOK2Q9UL54 1235 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 CYP2D7A0A087X1C5 515 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 MINDY4BA8MYZ0 360 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 REC8O95072 547 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 CYP2D6P10635 497 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 DCAF15Q66K64 600 aa20.18■□□□□ 0.82
SF3B2-211ENST00000531041 ROBO3Q96MS0 1386 aa20.17■□□□□ 0.82
SF3B2-211ENST00000531041 PPP1R12BO60237 982 aaPredicted RBP20.17■□□□□ 0.82
SF3B2-211ENST00000531041 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
SF3B2-211ENST00000531041 EVX2Q03828 476 aa20.17■□□□□ 0.82
SF3B2-211ENST00000531041 GABPAQ06546 454 aa20.17■□□□□ 0.82
SF3B2-211ENST00000531041 CST9Q5W186 159 aa20.17■□□□□ 0.82
SF3B2-211ENST00000531041 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
SF3B2-211ENST00000531041 U3KPZ7 1027 aaPredicted RBP20.17■□□□□ 0.82
SF3B2-211ENST00000531041 DOCK1Q14185 1865 aa20.16■□□□□ 0.82
SF3B2-211ENST00000531041 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
SF3B2-211ENST00000531041 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
SF3B2-211ENST00000531041 PPARAQ07869 468 aa20.16■□□□□ 0.82
SF3B2-211ENST00000531041 MIGA2Q7L4E1 593 aa20.16■□□□□ 0.82
SF3B2-211ENST00000531041 CRACR2BQ8N4Y2 399 aaPredicted RBP20.16■□□□□ 0.82
SF3B2-211ENST00000531041 SMIM22K7EJ46 135 aa20.15■□□□□ 0.82
SF3B2-211ENST00000531041 USP2O75604 605 aaPredicted RBP20.15■□□□□ 0.82
SF3B2-211ENST00000531041 FKBP1BP68106 108 aa20.15■□□□□ 0.82
SF3B2-211ENST00000531041 ZNF341Q9BYN7 854 aa20.15■□□□□ 0.82
SF3B2-211ENST00000531041 DNAJC18Q9H819 358 aa20.15■□□□□ 0.82
SF3B2-211ENST00000531041 ZNF408Q9H9D4 720 aa20.15■□□□□ 0.82
SF3B2-211ENST00000531041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.15■□□□□ 0.82
SF3B2-211ENST00000531041 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
SF3B2-211ENST00000531041 ZNF213O14771 459 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 SLURP2P0DP57 97 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
SF3B2-211ENST00000531041 C16orf86Q6ZW13 317 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 TRIM34Q9BYJ4 488 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 GBA2Q9HCG7 927 aaPredicted RBP20.14■□□□□ 0.81
SF3B2-211ENST00000531041 SWAP70Q9UH65 585 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.81
SF3B2-211ENST00000531041 FAM196BA6NMK8 535 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
SF3B2-211ENST00000531041 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 ARMC9Q7Z3E5 817 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 C2orf69Q8N8R5 385 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 KLRG1Q96E93 195 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 FZD1Q9UP38 647 aa20.13■□□□□ 0.81
SF3B2-211ENST00000531041 PHF20L1A8MW92 1017 aa20.12■□□□□ 0.81
SF3B2-211ENST00000531041 PRKG1Q13976 671 aa20.12■□□□□ 0.81
SF3B2-211ENST00000531041 TATDN1Q6P1N9 297 aa20.12■□□□□ 0.81
SF3B2-211ENST00000531041 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
SF3B2-211ENST00000531041 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
SF3B2-211ENST00000531041 PHIPQ8WWQ0 1821 aa20.12■□□□□ 0.81
SF3B2-211ENST00000531041 SHMT1P34896 483 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
SF3B2-211ENST00000531041 CDK8P49336 464 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 HAND2P61296 217 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 CTDSPL2Q05D32 466 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 PDE4BQ07343 736 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 TTLL12Q14166 644 aaPredicted RBP20.11■□□□□ 0.81
SF3B2-211ENST00000531041 SLC44A5Q8NCS7 719 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.11■□□□□ 0.81
SF3B2-211ENST00000531041 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
SF3B2-211ENST00000531041 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 CYP21A2P08686 494 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 FGRP09769 529 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 PCP11498 1178 aaKnown RBP20.1■□□□□ 0.81
SF3B2-211ENST00000531041 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 USP26Q9BXU7 913 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 CTNND1O60716 968 aaKnown RBP20.1■□□□□ 0.81
SF3B2-211ENST00000531041 SEC24BO95487 1268 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 AKNAD1Q5T1N1 836 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 LDLRAD1Q5T700 205 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 MOB2Q70IA6 237 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 STAG1Q8WVM7 1258 aa20.1■□□□□ 0.81
SF3B2-211ENST00000531041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.1■□□□□ 0.81
SF3B2-211ENST00000531041 UBE2Q2LH0YL09 131 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 SLC27A2O14975 620 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 CAP2P40123 477 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 APLP1P51693 650 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 MAP3K9P80192 1104 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
SF3B2-211ENST00000531041 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 CREB3L3Q68CJ9 461 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 TBC1D10CQ8IV04 446 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 ANKRD13AQ8IZ07 590 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 STK11IPQ8N1F8 1099 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 RNF41Q9H4P4 317 aaPredicted RBP20.09■□□□□ 0.81
SF3B2-211ENST00000531041 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
SF3B2-211ENST00000531041 MYH4Q9Y623 1939 aa20.08■□□□□ 0.81
SF3B2-211ENST00000531041 ORC4O43929 436 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 RASA1P20936 1047 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 INPP5BP32019 993 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 HSPA4P34932 840 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 RRP1BQ14684 758 aaKnown RBP20.08■□□□□ 0.8
SF3B2-211ENST00000531041 MFSD6Q6ZSS7 791 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.08■□□□□ 0.8
SF3B2-211ENST00000531041 CCDC17Q96LX7 622 aa20.08■□□□□ 0.8
SF3B2-211ENST00000531041 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms