RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
SDC2-203ENST00000519587 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 EHD4Q9H223 541 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 PRDM10Q9NQV6 1147 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
SDC2-203ENST00000519587 NF2P35240 595 aa16.79■□□□□ 0.28
SDC2-203ENST00000519587 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
SDC2-203ENST00000519587 RNF41Q9H4P4 317 aaPredicted RBP16.79■□□□□ 0.28
SDC2-203ENST00000519587 HERC5Q9UII4 1024 aaKnown RBP16.79■□□□□ 0.28
SDC2-203ENST00000519587 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
SDC2-203ENST00000519587 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
SDC2-203ENST00000519587 ADM5C9JUS6 153 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 HSPA4P34932 840 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 PDE4BQ07343 736 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 KRT32Q14532 448 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 SLC4A8Q2Y0W8 1093 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
SDC2-203ENST00000519587 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
SDC2-203ENST00000519587 SLC27A2O14975 620 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 SEC24BO95487 1268 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 CYP2D6P10635 497 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 NT5C2P49902 561 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 HAND2P61296 217 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 NECTIN1Q15223 517 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.28
SDC2-203ENST00000519587 SH3BP5LQ7L8J4 393 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 USP48Q86UV5 1035 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 FOXP4Q8IVH2 680 aaPredicted RBP16.77■□□□□ 0.28
SDC2-203ENST00000519587 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
SDC2-203ENST00000519587 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.27
SDC2-203ENST00000519587 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 TRDNQ13061 729 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 C16orf86Q6ZW13 317 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 STAG1Q8WVM7 1258 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 CDCA5Q96FF9 252 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 TEPSINQ96N21 525 aa16.76■□□□□ 0.27
SDC2-203ENST00000519587 GLIS2Q9BZE0 524 aaPredicted RBP16.76■□□□□ 0.27
SDC2-203ENST00000519587 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
SDC2-203ENST00000519587 CYP21A2P08686 494 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 CTCFP49711 727 aaPredicted RBP16.75■□□□□ 0.27
SDC2-203ENST00000519587 PLCD1P51178 756 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 ANAPC15P60006 121 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 RALYLQ86SE5 291 aaKnown RBP16.75■□□□□ 0.27
SDC2-203ENST00000519587 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
SDC2-203ENST00000519587 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
SDC2-203ENST00000519587 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 TBC1D12O60347 775 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 NBPF12Q5TAG4 269 aaPredicted RBP16.74■□□□□ 0.27
SDC2-203ENST00000519587 TBC1D10CQ8IV04 446 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 KRT23Q9C075 422 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.74■□□□□ 0.277e-12■■■□□ 14.7
SDC2-203ENST00000519587 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 ATAD5Q96QE3 1844 aa16.74■□□□□ 0.27
SDC2-203ENST00000519587 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 ORC4O43929 436 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 PSMA5P28066 241 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 CDK8P49336 464 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 GABPAQ06546 454 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 KCNB2Q92953 911 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 ZNF341Q9BYN7 854 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
SDC2-203ENST00000519587 E7EWF7 191 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
SDC2-203ENST00000519587 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
SDC2-203ENST00000519587 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
SDC2-203ENST00000519587 CDAN1Q8IWY9 1227 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 ESR2Q92731 530 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 TBC1D32Q96NH3 1257 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
SDC2-203ENST00000519587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDC2-203ENST00000519587 NEDD4P46934 1319 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 FGRP09769 529 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
SDC2-203ENST00000519587 MAP3K10Q02779 954 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 RRP12Q5JTH9 1297 aaKnown RBP16.71■□□□□ 0.27
SDC2-203ENST00000519587 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
SDC2-203ENST00000519587 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 SLC44A5Q8NCS7 719 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
SDC2-203ENST00000519587 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
SDC2-203ENST00000519587 TRAF5O00463 557 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms