RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 ADAMTSL1Q8N6G6 1762 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 COL2A1P02458 1487 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 TBC1D12O60347 775 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 PCP11498 1178 aaKnown RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 NT5C2P49902 561 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 PDE4BQ07343 736 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 PPARAQ07869 468 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 NECTIN1Q15223 517 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 DCAF15Q66K64 600 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 ZFPM1Q8IX07 1006 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 CRACR2BQ8N4Y2 399 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 TMEM39BQ9GZU3 492 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 EHD4Q9H223 541 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 RNF41Q9H4P4 317 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 HERC5Q9UII4 1024 aaKnown RBP8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 SERPINB13Q9UIV8 391 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.06
SCARNA6-201ENST00000515982 MYH1P12882 1939 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 DDTLA6NHG4 134 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 CCDC85CA6NKD9 419 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 FOXP2O15409 715 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 ITGBL1O95965 494 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 PLCD1P51178 756 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 MAP3K10Q02779 954 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 KRT32Q14532 448 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 MAP1SQ66K74 1059 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 CREB3L3Q68CJ9 461 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 GLIS2Q9BZE0 524 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
SCARNA6-201ENST00000515982 CDK5RAP2Q96SN8 1893 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 ADM5C9JUS6 153 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 SLC27A2O14975 620 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 SEC24BO95487 1268 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 CYP21A2P08686 494 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 CYP2D6P10635 497 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 HSPA4P34932 840 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 HAND2P61296 217 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 TRDNQ13061 729 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 AKNAD1Q5T1N1 836 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 MFSD6Q6ZSS7 791 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 KCNB2Q92953 911 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 CCDC17Q96LX7 622 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 ZNF341Q9BYN7 854 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 KRT23Q9C075 422 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 CNNM2Q9H8M5 875 aa8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 SCAF8Q9UPN6 1271 aaKnown RBP8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 BAZ2AQ9UIF9 1905 aaKnown RBP8.38□□□□□ -1.07
SCARNA6-201ENST00000515982 NAV1Q8NEY1 1877 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 CYP2D7A0A087X1C5 515 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 FGRP09769 529 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 CDK8P49336 464 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 ANAPC15P60006 121 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 FKBP1BP68106 108 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 GABPAQ06546 454 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 PRAMEF18Q5VWM3 479 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 ARMC9Q7Z3E5 817 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 C2orf69Q8N8R5 385 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 C22orf23Q9BZE7 217 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 GINM1Q9NU53 330 aa8.37□□□□□ -1.07
SCARNA6-201ENST00000515982 UNCXA6NJT0 531 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 RASSF10A6NK89 507 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 E7EWF7 191 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 ORC4O43929 436 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 PSMA5P28066 241 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 MAP2K1Q02750 393 aaPredicted RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 DEFB115Q30KQ5 88 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 CERKLQ49MI3 558 aaPredicted RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 CCDC178Q5BJE1 867 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
SCARNA6-201ENST00000515982 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms