RNA–Protein interactions for RNA: ENST00000513459.5

PACRGL-227, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-227ENST00000513459 ZNF408Q9H9D4 720 aa25.28■■□□□ 1.64
PACRGL-227ENST00000513459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.28■■□□□ 1.64
PACRGL-227ENST00000513459 ZNF287Q9HBT7 754 aa25.28■■□□□ 1.64
PACRGL-227ENST00000513459 POLR2AP24928 1970 aaKnown RBP25.27■■□□□ 1.64
PACRGL-227ENST00000513459 NAV1Q8NEY1 1877 aa25.27■■□□□ 1.64
PACRGL-227ENST00000513459 TBC1D12O60347 775 aa25.27■■□□□ 1.64
PACRGL-227ENST00000513459 HAND2P61296 217 aa25.27■■□□□ 1.64
PACRGL-227ENST00000513459 RNF20Q5VTR2 975 aa25.27■■□□□ 1.64
PACRGL-227ENST00000513459 ANAPC4Q9UJX5 808 aa25.27■■□□□ 1.64
PACRGL-227ENST00000513459 DYNLL2Q96FJ2 89 aa25.26■■□□□ 1.63
PACRGL-227ENST00000513459 SWAP70Q9UH65 585 aa25.26■■□□□ 1.63
PACRGL-227ENST00000513459 MYH1P12882 1939 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 EVX2Q03828 476 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 CTDSPL2Q05D32 466 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 PDE4BQ07343 736 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 TTLL12Q14166 644 aaPredicted RBP25.25■■□□□ 1.63
PACRGL-227ENST00000513459 METTL16Q86W50 562 aaKnown RBP25.25■■□□□ 1.63
PACRGL-227ENST00000513459 STK11IPQ8N1F8 1099 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 USP26Q9BXU7 913 aa25.25■■□□□ 1.63
PACRGL-227ENST00000513459 CELF2O95319 508 aaKnown RBP25.24■■□□□ 1.63
PACRGL-227ENST00000513459 SEC24BO95487 1268 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 MCCP23508 829 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 FMR1Q06787 632 aaKnown RBP eCLIP25.24■■□□□ 1.63
PACRGL-227ENST00000513459 PRKG1Q13976 671 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 NECTIN1Q15223 517 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 C16orf86Q6ZW13 317 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 ZNF341Q9BYN7 854 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 DDX60LQ5H9U9 1706 aaKnown RBP25.24■■□□□ 1.63
PACRGL-227ENST00000513459 BAZ2AQ9UIF9 1905 aaKnown RBP25.24■■□□□ 1.63
PACRGL-227ENST00000513459 ROBO3Q96MS0 1386 aa25.24■■□□□ 1.63
PACRGL-227ENST00000513459 MAP3K10Q02779 954 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 GABPAQ06546 454 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 RNF41Q9H4P4 317 aaPredicted RBP25.23■■□□□ 1.63
PACRGL-227ENST00000513459 UPF2Q9HAU5 1272 aaKnown RBP25.23■■□□□ 1.63
PACRGL-227ENST00000513459 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 FAM196BA6NMK8 535 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 SMIM22K7EJ46 135 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 CYP21A2P08686 494 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 ZKSCAN1P17029 563 aaPredicted RBP25.23■■□□□ 1.63
PACRGL-227ENST00000513459 CREB3L3Q68CJ9 461 aa25.23■■□□□ 1.63
PACRGL-227ENST00000513459 IREB2P48200 963 aaKnown RBP25.22■■□□□ 1.63
PACRGL-227ENST00000513459 CDK8P49336 464 aa25.22■■□□□ 1.63
PACRGL-227ENST00000513459 MFSD6Q6ZSS7 791 aa25.22■■□□□ 1.63
PACRGL-227ENST00000513459 ARMC9Q7Z3E5 817 aa25.22■■□□□ 1.63
PACRGL-227ENST00000513459 BACH2Q9BYV9 841 aa25.22■■□□□ 1.63
PACRGL-227ENST00000513459 PASKQ96RG2 1323 aa25.22■■□□□ 1.63
PACRGL-227ENST00000513459 SLC27A2O14975 620 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 PCP11498 1178 aaKnown RBP25.21■■□□□ 1.63
PACRGL-227ENST00000513459 FKBP1BP68106 108 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 AKNAD1Q5T1N1 836 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 C2orf69Q8N8R5 385 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 SSC5DA1L4H1 1573 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 SLURP2P0DP57 97 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 HSPA4P34932 840 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 SLC44A5Q8NCS7 719 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 DNAJC18Q9H819 358 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 GBA2Q9HCG7 927 aaPredicted RBP25.21■■□□□ 1.63
PACRGL-227ENST00000513459 TOMM22Q9NS69 142 aa25.21■■□□□ 1.63
PACRGL-227ENST00000513459 ANGEL1Q9UNK9 670 aaKnown RBP25.21■■□□□ 1.63
PACRGL-227ENST00000513459 USP2O75604 605 aaPredicted RBP25.2■■□□□ 1.62
PACRGL-227ENST00000513459 STAG1Q8WVM7 1258 aa25.2■■□□□ 1.62
PACRGL-227ENST00000513459 WRNIP1Q96S55 665 aa25.2■■□□□ 1.62
PACRGL-227ENST00000513459 TRDNQ13061 729 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 TATDN1Q6P1N9 297 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 TBC1D10CQ8IV04 446 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 ZNF444Q8N0Y2 327 aaPredicted RBP25.19■■□□□ 1.62
PACRGL-227ENST00000513459 KLRG1Q96E93 195 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 NBPF3Q9H094 633 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 FZD1Q9UP38 647 aa25.19■■□□□ 1.62
PACRGL-227ENST00000513459 PRDM1O75626 825 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 SHMT1P34896 483 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 CERKLQ49MI3 558 aaPredicted RBP25.18■■□□□ 1.62
PACRGL-227ENST00000513459 CST9Q5W186 159 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 CNNM2Q9H8M5 875 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 PHF20L1A8MW92 1017 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 ZNF112Q9UJU3 913 aa25.18■■□□□ 1.62
PACRGL-227ENST00000513459 CTNND1O60716 968 aaKnown RBP25.17■■□□□ 1.62
PACRGL-227ENST00000513459 FGRP09769 529 aa25.17■■□□□ 1.62
PACRGL-227ENST00000513459 MAP3K11Q16584 847 aa25.17■■□□□ 1.62
PACRGL-227ENST00000513459 RRP12Q5JTH9 1297 aaKnown RBP25.17■■□□□ 1.62
PACRGL-227ENST00000513459 CCDC17Q96LX7 622 aa25.17■■□□□ 1.62
PACRGL-227ENST00000513459 MAP3K9P80192 1104 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 KRT32Q14532 448 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 KRT23Q9C075 422 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 INCENPQ9NQS7 918 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.16■■□□□ 1.62
PACRGL-227ENST00000513459 LAMB1P07942 1786 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 E7EWF7 191 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 ORC4O43929 436 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 NT5C2P49902 561 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 RALYLQ86SE5 291 aaKnown RBP25.16■■□□□ 1.62
PACRGL-227ENST00000513459 ANKRD13AQ8IZ07 590 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.16■■□□□ 1.62
PACRGL-227ENST00000513459 CABP5Q9NP86 173 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 CSADQ9Y600 493 aa25.16■■□□□ 1.62
PACRGL-227ENST00000513459 MPHOSPH10O00566 681 aaKnown RBP25.15■■□□□ 1.62
PACRGL-227ENST00000513459 RANBP6O60518 1105 aaKnown RBP25.15■■□□□ 1.62
PACRGL-227ENST00000513459 RASA1P20936 1047 aa25.15■■□□□ 1.62
PACRGL-227ENST00000513459 CAP2P40123 477 aa25.15■■□□□ 1.62
PACRGL-227ENST00000513459 TSGA10IPQ3SY00 556 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms