RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 SERPINB8P50452 374 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 TTF1Q15361 905 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 BICD1Q96G01 975 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ZNF692Q9BU19 519 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 UTP6Q9NYH9 597 aaKnown RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ZNF644Q9H582 1327 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 GRIN2BQ13224 1484 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 CHGAP10645 457 aaKnown RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 POLR2EP19388 210 aaKnown RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 UBL4BQ8N7F7 174 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 CNNM2Q9H8M5 875 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ANO9A1A5B4 782 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 TBCCQ15814 346 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 GRAMD4Q6IC98 578 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 LRRC8AQ8IWT6 810 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 PLA2R1Q13018 1463 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ATP6V0A4Q9HBG4 840 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 TAOK2Q9UL54 1235 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 MAPK8IP2Q13387 824 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 NUF2Q9BZD4 464 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 RFX7Q2KHR2 1363 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ELF1P32519 619 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 TBC1D5Q92609 795 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 GOPCQ9HD26 462 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 CHGBP05060 677 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 ZSCAN20P17040 1043 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
LINC02397-201ENST00000504409 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
LINC02397-201ENST00000504409 THAP12O43422 761 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 ACADVLP49748 655 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CRELD2Q6UXH1 353 aaPredicted RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 GLT8D2Q9H1C3 349 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 DNAJC17Q9NVM6 304 aaKnown RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 A0A1W2PQ27 194 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 A0A1W2PQ64 194 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 A0A1W2PQD8 194 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 PASD1Q8IV76 773 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 KCNH8Q96L42 1107 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 FAM81BQ96LP2 452 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 PPIP5K2O43314 1243 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 U2AF2P26368 475 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 SAR1BQ9Y6B6 198 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 KCNA4P22459 653 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TOMM22Q9NS69 142 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 I3L4J1 428 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 ARHGEF18Q6ZSZ5 1173 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 USP33Q8TEY7 942 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 POP5Q969H6 163 aaKnown RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TMX3Q96JJ7 454 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 IWS1Q96ST2 819 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 MCM9Q9NXL9 1143 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TEKT2Q9UIF3 430 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 SSX2IPQ9Y2D8 614 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CYLC2Q14093 348 aaPredicted RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 ELF2Q15723 593 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TWISTNBQ3B726 338 aaPredicted RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 EFHD1Q9BUP0 239 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 PRAG1Q86YV5 1406 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TNKSO95271 1327 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 GSTTP1A0A1W2PQM5 241 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CORO7P57737 925 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TRAPPC9Q96Q05 1148 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CD109Q6YHK3 1445 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 TBKBP1A7MCY6 615 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 AHCYL1O43865 530 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 KDM1AO60341 852 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 SYKP43405 635 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 NOL8Q76FK4 1167 aaKnown RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 SRRM1Q8IYB3 904 aaKnown RBP6.75□□□□□ -1.33
LINC02397-201ENST00000504409 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
LINC02397-201ENST00000504409 KRT6AP02538 564 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 KRT6BP04259 564 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ACADSP16219 412 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 GRID2IPA4D2P6 1211 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 RSPH10B2B2RC85 870 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 RSPH10BP0C881 870 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CALM1P0DP23 149 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CALM2P0DP24 149 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CALM3P0DP25 149 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PDE6CP51160 858 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 NBPF15Q8N660 670 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC124Q96CT7 223 aaKnown RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PANX2Q96RD6 677 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ZWINTO95229 277 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 NEK2P51955 445 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 STX17P56962 302 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 USH1GQ495M9 461 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 C6orf118Q5T5N4 469 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 KRT27Q7Z3Y8 459 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ITFG2Q969R8 447 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ZNF830Q96NB3 372 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 SENP1Q9P0U3 644 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 IGF1RP08069 1367 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ABCD1P33897 745 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms