RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 ROBO3Q96MS0 1386 aa27.91■■■□□ 2.06
HMCES-204ENST00000502878 ECM29Q5VYK3 1845 aa27.9■■■□□ 2.06
HMCES-204ENST00000502878 PDE4BQ07343 736 aa27.9■■■□□ 2.06
HMCES-204ENST00000502878 ZFPM1Q8IX07 1006 aa27.9■■■□□ 2.06
HMCES-204ENST00000502878 ESR2Q92731 530 aa27.9■■■□□ 2.06
HMCES-204ENST00000502878 ORC4O43929 436 aa27.9■■■□□ 2.06
HMCES-204ENST00000502878 SH2B1Q9NRF2 756 aaPredicted RBP27.9■■■□□ 2.06
HMCES-204ENST00000502878 SBF1O95248 1867 aa27.89■■■□□ 2.06
HMCES-204ENST00000502878 RANBP6O60518 1105 aaKnown RBP27.89■■■□□ 2.06
HMCES-204ENST00000502878 TCP10Q12799 353 aa27.89■■■□□ 2.06
HMCES-204ENST00000502878 NECAB1Q8N987 351 aa27.89■■■□□ 2.06
HMCES-204ENST00000502878 MTMR14Q8NCE2 650 aa27.89■■■□□ 2.06
HMCES-204ENST00000502878 MYH1P12882 1939 aa27.89■■■□□ 2.05
HMCES-204ENST00000502878 SLC44A5Q8NCS7 719 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 IGDCC4Q8TDY8 1250 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 ZKSCAN3Q9BRR0 538 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 RNF181Q9P0P0 153 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 CLRN2A0PK11 232 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 ZNF280AP59817 542 aaPredicted RBP27.88■■■□□ 2.05
HMCES-204ENST00000502878 ST3GAL1Q11201 340 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 DPF2Q92785 391 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 TMEM87BQ96K49 555 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 MYOZ2Q9NPC6 264 aa27.88■■■□□ 2.05
HMCES-204ENST00000502878 DICER1Q9UPY3 1922 aaKnown RBP27.87■■■□□ 2.05
HMCES-204ENST00000502878 SH2B2O14492 632 aaPredicted RBP27.87■■■□□ 2.05
HMCES-204ENST00000502878 STK3Q13188 491 aa27.87■■■□□ 2.05
HMCES-204ENST00000502878 GPR162Q16538 588 aa27.87■■■□□ 2.05
HMCES-204ENST00000502878 ZBED3Q96IU2 234 aaPredicted RBP27.87■■■□□ 2.05
HMCES-204ENST00000502878 TTC6Q86TZ1 520 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 CCDC83Q8IWF9 413 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 MICALL2Q8IY33 904 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 SENP2Q9HC62 589 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 ZNF70Q9UC06 446 aaPredicted RBP27.86■■■□□ 2.05
HMCES-204ENST00000502878 ANGEL1Q9UNK9 670 aaKnown RBP27.86■■■□□ 2.05
HMCES-204ENST00000502878 IFIT3O14879 490 aaKnown RBP27.86■■■□□ 2.05
HMCES-204ENST00000502878 TMEM67Q5HYA8 995 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 FAM47AQ5JRC9 791 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 C16orf86Q6ZW13 317 aa27.86■■■□□ 2.05
HMCES-204ENST00000502878 CNOT7Q9UIV1 285 aaKnown RBP27.86■■■□□ 2.05
HMCES-204ENST00000502878 NPM3O75607 178 aaKnown RBP27.85■■■□□ 2.05
HMCES-204ENST00000502878 EGFRP00533 1210 aa27.85■■■□□ 2.05
HMCES-204ENST00000502878 INTS4Q96HW7 963 aaKnown RBP27.85■■■□□ 2.05
HMCES-204ENST00000502878 MKNK2Q9HBH9 465 aa27.85■■■□□ 2.05
HMCES-204ENST00000502878 BRPF3Q9ULD4 1205 aa27.85■■■□□ 2.05
HMCES-204ENST00000502878 WNT10BO00744 389 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 DDIT3P35638 169 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 CDK8P49336 464 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 EVCP57679 992 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 NBPF9Q3BBW0 867 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 SPDYE2Q495Y8 402 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 RBM26Q5T8P6 1007 aaKnown RBP27.84■■■□□ 2.05
HMCES-204ENST00000502878 LY9Q9HBG7 655 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 TMOD2Q9NZR1 351 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 NAP1L2Q9ULW6 460 aaPredicted RBP27.84■■■□□ 2.05
HMCES-204ENST00000502878 MMP14P50281 582 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 C9orf131Q5VYM1 1079 aa27.84■■■□□ 2.05
HMCES-204ENST00000502878 DDTLA6NHG4 134 aaPredicted RBP27.83■■■□□ 2.05
HMCES-204ENST00000502878 TCP10L2B9ZVM9 353 aa27.83■■■□□ 2.05
HMCES-204ENST00000502878 SH3BP5LQ7L8J4 393 aa27.83■■■□□ 2.05
HMCES-204ENST00000502878 UBAC1Q9BSL1 405 aa27.83■■■□□ 2.05
HMCES-204ENST00000502878 KLF18A0A0U1RQI7 1052 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 ENTPD3O75355 529 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 PDIA3P30101 505 aaKnown RBP27.82■■■□□ 2.04
HMCES-204ENST00000502878 GABPAQ06546 454 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 SAMD7Q7Z3H4 446 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 GPC2Q8N158 579 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 ZNF274Q96GC6 653 aaPredicted RBP27.82■■■□□ 2.04
HMCES-204ENST00000502878 DTNBO60941 627 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 RASA1P20936 1047 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 SART3Q15020 963 aaKnown RBP27.82■■■□□ 2.04
HMCES-204ENST00000502878 MTA3Q9BTC8 594 aa27.82■■■□□ 2.04
HMCES-204ENST00000502878 TNKSO95271 1327 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 TSPY2A6NKD2 308 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 PFKFB2O60825 505 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 HLA-DOAP06340 250 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 LIFRP42702 1097 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 TFAP4Q01664 338 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 ZSCAN29Q8IWY8 852 aaPredicted RBP27.81■■■□□ 2.04
HMCES-204ENST00000502878 ZSCAN10Q96SZ4 725 aaPredicted RBP27.81■■■□□ 2.04
HMCES-204ENST00000502878 DHX36Q9H2U1 1008 aaKnown RBP27.81■■■□□ 2.04
HMCES-204ENST00000502878 VEZTQ9HBM0 779 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 ZNF287Q9HBT7 754 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 SERPINB13Q9UIV8 391 aa27.81■■■□□ 2.04
HMCES-204ENST00000502878 IQCA1Q86XH1 822 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 ZNF444Q8N0Y2 327 aaPredicted RBP27.8■■■□□ 2.04
HMCES-204ENST00000502878 GTF3C6Q969F1 213 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 ERICH2A1L162 156 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 MYO1BO43795 1136 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 SLURP2P0DP57 97 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 SCRN1Q12765 414 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 WTAPQ15007 396 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 SEC23AQ15436 765 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 TBC1D10BQ4KMP7 808 aaPredicted RBP27.8■■■□□ 2.04
HMCES-204ENST00000502878 SGMS1Q86VZ5 419 aa27.8■■■□□ 2.04
HMCES-204ENST00000502878 NMT2O60551 498 aa27.79■■■□□ 2.04
HMCES-204ENST00000502878 CCT2P78371 535 aaKnown RBP27.79■■■□□ 2.04
HMCES-204ENST00000502878 NFXL1Q6ZNB6 911 aa27.79■■■□□ 2.04
HMCES-204ENST00000502878 RAB11FIP4Q86YS3 637 aa27.79■■■□□ 2.04
HMCES-204ENST00000502878 ENAHQ8N8S7 591 aaPredicted RBP27.79■■■□□ 2.04
HMCES-204ENST00000502878 CWC22Q9HCG8 908 aaKnown RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms