RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GBA2Q9HCG7 927 aaPredicted RBP17.35■□□□□ 0.37
BRCA1-223ENST00000494123 CTNNA3Q9UI47 895 aa17.35■□□□□ 0.37
BRCA1-223ENST00000494123 HERC5Q9UII4 1024 aaKnown RBP17.35■□□□□ 0.37
BRCA1-223ENST00000494123 SERPINB13Q9UIV8 391 aa17.35■□□□□ 0.37
BRCA1-223ENST00000494123 REC8O95072 547 aa17.34■□□□□ 0.37
BRCA1-223ENST00000494123 SLC3A2P08195 630 aaKnown RBP17.34■□□□□ 0.37
BRCA1-223ENST00000494123 PTH1RQ03431 593 aa17.34■□□□□ 0.37
BRCA1-223ENST00000494123 PPARAQ07869 468 aa17.34■□□□□ 0.37
BRCA1-223ENST00000494123 ARMC9Q7Z3E5 817 aa17.34■□□□□ 0.37
BRCA1-223ENST00000494123 ZNF341Q9BYN7 854 aa17.34■□□□□ 0.37
BRCA1-223ENST00000494123 ANGEL1Q9UNK9 670 aaKnown RBP17.34■□□□□ 0.37
BRCA1-223ENST00000494123 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
BRCA1-223ENST00000494123 FAM196BA6NMK8 535 aa17.33■□□□□ 0.37
BRCA1-223ENST00000494123 TBC1D12O60347 775 aa17.33■□□□□ 0.37
BRCA1-223ENST00000494123 IREB2P48200 963 aaKnown RBP17.33■□□□□ 0.37
BRCA1-223ENST00000494123 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.37
BRCA1-223ENST00000494123 FZD1Q9UP38 647 aa17.33■□□□□ 0.37
BRCA1-223ENST00000494123 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.36
BRCA1-223ENST00000494123 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
BRCA1-223ENST00000494123 FKBP1BP68106 108 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 EVX2Q03828 476 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 CST9Q5W186 159 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 MYH8P13535 1937 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 ZNF213O14771 459 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 HAND2P61296 217 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
BRCA1-223ENST00000494123 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 WRNIP1Q96S55 665 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
BRCA1-223ENST00000494123 LAMA4Q16363 1823 aa17.32■□□□□ 0.36
BRCA1-223ENST00000494123 USP2O75604 605 aaPredicted RBP17.31■□□□□ 0.36
BRCA1-223ENST00000494123 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
BRCA1-223ENST00000494123 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
BRCA1-223ENST00000494123 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
BRCA1-223ENST00000494123 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 APLP1P51693 650 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 GABPAQ06546 454 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 PDE4BQ07343 736 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 C16orf86Q6ZW13 317 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
BRCA1-223ENST00000494123 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 DNAJC18Q9H819 358 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
BRCA1-223ENST00000494123 ABT1Q9ULW3 272 aaKnown RBP17.3■□□□□ 0.36
BRCA1-223ENST00000494123 UBE2Q2LH0YL09 131 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 CDK8P49336 464 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
BRCA1-223ENST00000494123 ANAPC4Q9UJX5 808 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 CSADQ9Y600 493 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 HUNKP57058 714 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRCA1-223ENST00000494123 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
BRCA1-223ENST00000494123 SHMT1P34896 483 aa17.28■□□□□ 0.36
BRCA1-223ENST00000494123 C1QTNF8P60827 252 aa17.28■□□□□ 0.36
BRCA1-223ENST00000494123 CERKLQ49MI3 558 aaPredicted RBP17.28■□□□□ 0.36
BRCA1-223ENST00000494123 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
BRCA1-223ENST00000494123 RNF41Q9H4P4 317 aaPredicted RBP17.28■□□□□ 0.36
BRCA1-223ENST00000494123 ZNF112Q9UJU3 913 aa17.28■□□□□ 0.36
BRCA1-223ENST00000494123 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 CTNND1O60716 968 aaKnown RBP17.27■□□□□ 0.36
BRCA1-223ENST00000494123 PRDM1O75626 825 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 CYP21A2P08686 494 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 INPP5BP32019 993 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 MFSD6Q6ZSS7 791 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-223ENST00000494123 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
BRCA1-223ENST00000494123 ATAD5Q96QE3 1844 aa17.27■□□□□ 0.35
BRCA1-223ENST00000494123 DOCK1Q14185 1865 aa17.27■□□□□ 0.35
BRCA1-223ENST00000494123 MPHOSPH10O00566 681 aaKnown RBP17.26■□□□□ 0.35
BRCA1-223ENST00000494123 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
BRCA1-223ENST00000494123 GDF11O95390 407 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 CAP2P40123 477 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 AKNAD1Q5T1N1 836 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 TBC1D10CQ8IV04 446 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
BRCA1-223ENST00000494123 PICK1Q9NRD5 415 aa17.26■□□□□ 0.35
BRCA1-223ENST00000494123 UNCXA6NJT0 531 aa17.25■□□□□ 0.35
BRCA1-223ENST00000494123 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
BRCA1-223ENST00000494123 MCCP23508 829 aa17.25■□□□□ 0.35
BRCA1-223ENST00000494123 VGLL4Q14135 290 aa17.25■□□□□ 0.35
BRCA1-223ENST00000494123 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
BRCA1-223ENST00000494123 ABCB5Q2M3G0 1257 aa17.25■□□□□ 0.35
BRCA1-223ENST00000494123 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms