RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 SUPT20HL1Q3ZLR7 823 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 C12orf60Q5U649 245 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 RBM46Q8TBY0 533 aaKnown RBP18.75■□□□□ 0.59
HPS4-216ENST00000493455 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.75■□□□□ 0.59
HPS4-216ENST00000493455 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 CTNNA3Q9UI47 895 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 ATRNL1Q5VV63 1379 aa18.75■□□□□ 0.59
HPS4-216ENST00000493455 COL2A1P02458 1487 aaPredicted RBP18.75■□□□□ 0.59
HPS4-216ENST00000493455 SSC5DA1L4H1 1573 aa18.74■□□□□ 0.59
HPS4-216ENST00000493455 ZNF213O14771 459 aa18.74■□□□□ 0.59
HPS4-216ENST00000493455 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
HPS4-216ENST00000493455 IMMTQ16891 758 aaKnown RBP18.74■□□□□ 0.59
HPS4-216ENST00000493455 SLC44A5Q8NCS7 719 aa18.74■□□□□ 0.59
HPS4-216ENST00000493455 SBK1Q52WX2 424 aa18.73■□□□□ 0.59
HPS4-216ENST00000493455 DCAF15Q66K64 600 aa18.73■□□□□ 0.59
HPS4-216ENST00000493455 SERPINB13Q9UIV8 391 aa18.73■□□□□ 0.59
HPS4-216ENST00000493455 ZMYM6O95789 1325 aa18.73■□□□□ 0.59
HPS4-216ENST00000493455 PRDM1O75626 825 aa18.72■□□□□ 0.59
HPS4-216ENST00000493455 ITGBL1O95965 494 aaPredicted RBP18.72■□□□□ 0.59
HPS4-216ENST00000493455 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
HPS4-216ENST00000493455 RRP12Q5JTH9 1297 aaKnown RBP18.72■□□□□ 0.59
HPS4-216ENST00000493455 MOB2Q70IA6 237 aa18.72■□□□□ 0.59
HPS4-216ENST00000493455 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
HPS4-216ENST00000493455 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
HPS4-216ENST00000493455 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
HPS4-216ENST00000493455 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
HPS4-216ENST00000493455 CREB3L3Q68CJ9 461 aa18.71■□□□□ 0.59
HPS4-216ENST00000493455 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
HPS4-216ENST00000493455 ZNF341Q9BYN7 854 aa18.71■□□□□ 0.59
HPS4-216ENST00000493455 MKNK2Q9HBH9 465 aa18.71■□□□□ 0.59
HPS4-216ENST00000493455 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
HPS4-216ENST00000493455 SLC27A2O14975 620 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 PPP1R12BO60237 982 aaPredicted RBP18.7■□□□□ 0.58
HPS4-216ENST00000493455 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
HPS4-216ENST00000493455 GDF11O95390 407 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 CYP21A2P08686 494 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 MCCP23508 829 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 CDK8P49336 464 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 FOXP4Q8IVH2 680 aaPredicted RBP18.7■□□□□ 0.58
HPS4-216ENST00000493455 USP26Q9BXU7 913 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 EHD4Q9H223 541 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
HPS4-216ENST00000493455 MPHOSPH10O00566 681 aaKnown RBP18.69■□□□□ 0.58
HPS4-216ENST00000493455 PDE4BQ07343 736 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 GBA2Q9HCG7 927 aaPredicted RBP18.69■□□□□ 0.58
HPS4-216ENST00000493455 HERC5Q9UII4 1024 aaKnown RBP18.69■□□□□ 0.58
HPS4-216ENST00000493455 TAF6LQ9Y6J9 622 aa18.69■□□□□ 0.58
HPS4-216ENST00000493455 ROBO3Q96MS0 1386 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 FSTL1Q12841 308 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 ARMC9Q7Z3E5 817 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 BACH2Q9BYV9 841 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 UPF2Q9HAU5 1272 aaKnown RBP18.68■□□□□ 0.58
HPS4-216ENST00000493455 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 TACC3Q9Y6A5 838 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 NEDD4P46934 1319 aa18.68■□□□□ 0.58
HPS4-216ENST00000493455 UBE2Q2LH0YL09 131 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
HPS4-216ENST00000493455 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
HPS4-216ENST00000493455 SHMT1P34896 483 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 IREB2P48200 963 aaKnown RBP18.67■□□□□ 0.58
HPS4-216ENST00000493455 GABPAQ06546 454 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
HPS4-216ENST00000493455 AKNAD1Q5T1N1 836 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 C2orf69Q8N8R5 385 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 ANAPC4Q9UJX5 808 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 PASKQ96RG2 1323 aa18.67■□□□□ 0.58
HPS4-216ENST00000493455 E7EWF7 191 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 TBC1D12O60347 775 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 INPP5BP32019 993 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 HSPA4P34932 840 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 SHROOM1Q2M3G4 852 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 CST9Q5W186 159 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 ZNF444Q8N0Y2 327 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 STAG1Q8WVM7 1258 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 ZKSCAN4Q969J2 545 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 RNF41Q9H4P4 317 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 ZNF287Q9HBT7 754 aa18.66■□□□□ 0.58
HPS4-216ENST00000493455 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.66■□□□□ 0.58
HPS4-216ENST00000493455 B4E1Z4 1266 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 AKR1B1P15121 316 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 RASA1P20936 1047 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 TRDNQ13061 729 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 RRP1BQ14684 758 aaKnown RBP18.65■□□□□ 0.58
HPS4-216ENST00000493455 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 RALYLQ86SE5 291 aaKnown RBP18.65■□□□□ 0.58
HPS4-216ENST00000493455 RASEFQ8IZ41 740 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 KLRG1Q96E93 195 aa18.65■□□□□ 0.58
HPS4-216ENST00000493455 ABT1Q9ULW3 272 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms