RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 FOXD4L6Q3SYB3 417 aaPredicted RBP23.57■■□□□ 1.36
ATP1A1-208ENST00000488733 FOXD4L3Q6VB84 417 aaPredicted RBP23.57■■□□□ 1.36
ATP1A1-208ENST00000488733 SH3RF3Q8TEJ3 882 aaPredicted RBP23.57■■□□□ 1.36
ATP1A1-208ENST00000488733 MKRN1Q9UHC7 482 aaKnown RBP23.57■■□□□ 1.36
ATP1A1-208ENST00000488733 CERS5Q8N5B7 392 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 GZF1Q9H116 711 aaPredicted RBP23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 VPS33BQ9H267 617 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 KCNQ5Q9NR82 932 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 MCM9Q9NXL9 1143 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 LAMB1P07942 1786 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 GAKO14976 1311 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 PDE4BQ07343 736 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 STK11IPQ8N1F8 1099 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 LARGE2Q8N3Y3 721 aa23.56■■□□□ 1.36
ATP1A1-208ENST00000488733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.362e-9■■■□□ 16.8
ATP1A1-208ENST00000488733 NID2Q14112 1375 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 CYP2D7A0A087X1C5 515 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 BTDP43251 543 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 USP48Q86UV5 1035 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 IQCA1Q86XH1 822 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 TAOK3Q9H2K8 898 aa23.55■■□□□ 1.36
ATP1A1-208ENST00000488733 C12orf60Q5U649 245 aa23.54■■□□□ 1.36
ATP1A1-208ENST00000488733 MXD3Q9BW11 206 aa23.54■■□□□ 1.36
ATP1A1-208ENST00000488733 FHDC1Q9C0D6 1143 aaPredicted RBP23.54■■□□□ 1.36
ATP1A1-208ENST00000488733 CNPY2Q9Y2B0 182 aa23.54■■□□□ 1.36
ATP1A1-208ENST00000488733 USP17L3A6NCW0 530 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 USP17L4A6NCW7 530 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 GOLGA8AA7E2F4 631 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 FDPSP14324 419 aaKnown RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 KRT85P78386 507 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 DNM1Q05193 864 aaKnown RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 PPP2R5BQ15173 497 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 USP17L1Q7RTZ2 530 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 FERMT3Q86UX7 667 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 ZSCAN10Q96SZ4 725 aaPredicted RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 SENP2Q9HC62 589 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 ORC3Q9UBD5 711 aaPredicted RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 RANBP6O60518 1105 aaKnown RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 FKBP1AP62942 108 aaKnown RBP23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 SEC23AQ15436 765 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 DACT2Q5SW24 774 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 ZKSCAN3Q9BRR0 538 aa23.53■■□□□ 1.36
ATP1A1-208ENST00000488733 SCN9AQ15858 1988 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 CCDC196A0A1B0GTZ2 297 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 NFKBIEO00221 500 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 GPT2Q8TD30 523 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 TGFBRAP1Q8WUH2 860 aa23.52■■□□□ 1.36
ATP1A1-208ENST00000488733 TNKSO95271 1327 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 FER1L6Q2WGJ9 1857 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 ADD1P35611 737 aaKnown RBP23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 RESTQ13127 1097 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 RAB11FIP4Q86YS3 637 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 TEX11Q8IYF3 940 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 ISY1Q9ULR0 285 aaKnown RBP23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 TTF2Q9UNY4 1162 aaKnown RBP23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 TCHHQ07283 1943 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 ROBO3Q96MS0 1386 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 COL4A5P29400 1685 aa23.51■■□□□ 1.35
ATP1A1-208ENST00000488733 F8W031 263 aaPredicted RBP23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 SMIM22K7EJ46 135 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 GDPD2Q9HCC8 539 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 CYP2D6P10635 497 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 CDC27P30260 824 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 NIM1KQ8IY84 436 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 SCAND2PQ9GZW5 306 aaPredicted RBP23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 ZNF287Q9HBT7 754 aa23.5■■□□□ 1.35
ATP1A1-208ENST00000488733 PRDM1O75626 825 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 RHBDL3P58872 404 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 UBE2HP62256 183 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 ZNF654Q8IZM8 581 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 C8orf76Q96K31 380 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 FAM217BQ9NTX9 383 aaPredicted RBP23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 DAGLAQ9Y4D2 1042 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 LTBP3Q9NS15 1303 aa23.49■■□□□ 1.35
ATP1A1-208ENST00000488733 FIBPO43427 364 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 POLR3DP05423 398 aaPredicted RBP23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 NTRK3Q16288 839 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 RTN1Q16799 776 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 IFIT1BQ5T764 474 aaKnown RBP23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 ATL3Q6DD88 541 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 ENAHQ8N8S7 591 aaPredicted RBP23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 NAV1Q8NEY1 1877 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 ELP1O95163 1332 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 STK36Q9NRP7 1315 aa23.48■■□□□ 1.35
ATP1A1-208ENST00000488733 CALM1P0DP23 149 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 CALM2P0DP24 149 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 CALM3P0DP25 149 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 IFNAR1P17181 557 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 RXRAP19793 462 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 CCDC178Q5BJE1 867 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 CAVIN1Q6NZI2 390 aaKnown RBP23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 HHIPL2Q6UWX4 724 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 MAPKAPK5Q8IW41 473 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 FBXO18Q8NFZ0 1043 aa23.47■■□□□ 1.35
ATP1A1-208ENST00000488733 MRIQ9BWK5 157 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms