RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 ORC4O43929 436 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 PCP11498 1178 aaKnown RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 AMOTL1Q8IY63 956 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 ESR2Q92731 530 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 ZNF541Q9H0D2 1346 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 LMNB1P20700 586 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
GYPC-205ENST00000464053 EVCP57679 992 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 PDE4BQ07343 736 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 LY9Q9HBG7 655 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
GYPC-205ENST00000464053 ANGEL1Q9UNK9 670 aaKnown RBP18.18■□□□□ 0.5
GYPC-205ENST00000464053 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
GYPC-205ENST00000464053 TCP10Q12799 353 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 DLGAP5Q15398 846 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 IDI2Q9BXS1 227 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
GYPC-205ENST00000464053 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
GYPC-205ENST00000464053 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 NAP1L2Q9ULW6 460 aaPredicted RBP18.16■□□□□ 0.5
GYPC-205ENST00000464053 KLF18A0A0U1RQI7 1052 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 PFKFB2O60825 505 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 GMPSP49915 693 aaPredicted RBP18.16■□□□□ 0.5
GYPC-205ENST00000464053 SCRN1Q12765 414 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 RAB11FIP4Q86YS3 637 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 ZNF274Q96GC6 653 aaPredicted RBP18.16■□□□□ 0.5
GYPC-205ENST00000464053 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
GYPC-205ENST00000464053 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
GYPC-205ENST00000464053 CDK8P49336 464 aa18.15■□□□□ 0.5
GYPC-205ENST00000464053 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
GYPC-205ENST00000464053 HPS5Q9UPZ3 1129 aa18.15■□□□□ 0.5
GYPC-205ENST00000464053 CLRN2A0PK11 232 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 NMT2O60551 498 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 RPS12P25398 132 aaKnown RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 CCT2P78371 535 aaKnown RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 SEC23AQ15436 765 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 SH3BP5LQ7L8J4 393 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 TTC6Q86TZ1 520 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 MTMR14Q8NCE2 650 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 MKNK2Q9HBH9 465 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.5
GYPC-205ENST00000464053 ZNF70Q9UC06 446 aaPredicted RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.14■□□□□ 0.5
GYPC-205ENST00000464053 SIPA1L1O43166 1804 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 TNKSO95271 1327 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.49
GYPC-205ENST00000464053 EGFRP00533 1210 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 SLURP2P0DP57 97 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 RASA1P20936 1047 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 LIFRP42702 1097 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 ZNF280AP59817 542 aaPredicted RBP18.14■□□□□ 0.49
GYPC-205ENST00000464053 PKP1Q13835 747 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 SGMS1Q86VZ5 419 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
GYPC-205ENST00000464053 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
GYPC-205ENST00000464053 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
GYPC-205ENST00000464053 TFAP4Q01664 338 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 GABPAQ06546 454 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 WTAPQ15007 396 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
GYPC-205ENST00000464053 NBPF9Q3BBW0 867 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 NFXL1Q6ZNB6 911 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 ENAHQ8N8S7 591 aaPredicted RBP18.13■□□□□ 0.49
GYPC-205ENST00000464053 MTA3Q9BTC8 594 aa18.13■□□□□ 0.49
GYPC-205ENST00000464053 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
GYPC-205ENST00000464053 TSPY2A6NKD2 308 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 TCP10L2B9ZVM9 353 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 WNT10BO00744 389 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 RXRAP19793 462 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 SPDYE2Q495Y8 402 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 APOA5Q6Q788 366 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 MICALL2Q8IY33 904 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 DPF2Q92785 391 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 CNOT7Q9UIV1 285 aaKnown RBP18.12■□□□□ 0.49
GYPC-205ENST00000464053 SMC3Q9UQE7 1217 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 ERICH2A1L162 156 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 GJB2P29033 226 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 RBM26Q5T8P6 1007 aaKnown RBP18.12■□□□□ 0.49
GYPC-205ENST00000464053 IQCA1Q86XH1 822 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
GYPC-205ENST00000464053 IL17RBQ9NRM6 502 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 SERPINB13Q9UIV8 391 aa18.12■□□□□ 0.49
GYPC-205ENST00000464053 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms